2ZV9

Lyn Tyrosine Kinase Domain-PP2 complex

Structural Biology Knowledgebase: 2ZV9 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.76 Å
  • R-Value Free: 0.231
  • R-Value Work: 0.195

Literature

Macromolecules
Sequence Display for 2ZV9

Classification: transferase

Total Structure Weight: 32113.67

Macromolecule Entities
Molecule Chains Length Organism Details
Tyrosine-protein kinase Lyn A 279 Mus musculus EC#: 2.7.10.2 IUBMB
Fragment: Kinase Domain, residues 239-512
Gene Name(s): Lyn
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PP2
Query on PP2

A 1-TERT-BUTYL-3-(4-CHLORO-PHENYL)-1H-PYRAZOLO[3,4- D]PYRIMIDIN-4-YLAMINE
C15 H17 Cl N5
PBBRWFOVCUAONR-UHFFFAOYSA-O
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
PP2 N/A in BindingDB
N/A in BindingMoad
IC50: 9 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.76 Å
  • R-Value Free: 0.231
  • R-Value Work: 0.195
  • Space Group: H 3

Unit Cell:

Length (Å) Angle (°)
a = 128.47 α = 90.00
b = 128.47 β = 90.00
c = 54.17 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-11-04
  • Released Date: 2008-11-11
  • Deposition author(s): Williams, N.K., Rossjohn, J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4