Crystal structure of the catalytic domain of pyrrolysyl-tRNA synthetase in complex with pyrrolysine and an ATP analogue DOI:10.2210/pdb2zce/pdb

2ZCE   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A+S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Ligase Structure Weight: 34154.52 Molecule: Pyrrolysyl-tRNA synthetase Polymer: 1 Type: protein Length: 291 Chains: A EC#: 6.1.1.26    Fragment: C-terminal domain Organism Methanosarcina mazei Gene Names pylS MM_1445 UniProtKB:   Protein Feature View | Search PDB | Q8PWY1         Source Hide Polymer: 1 Scientific Name: Methanosarcina mazei   Taxonomy   Expression System: Escherichia coli       Related PDB Entries Hide Identifier Details 2E3C    2ZCD        Ligand Chemical Component Hide Identifier Formula Name Interactions ANP Search  Download  C10 H17 N6 O12 P3 PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER   Ligand Explorer MG Search  Download  Mg MAGNESIUM ION   Ligand Explorer PYH Search  Download  C12 H21 N3 O3 N~6~-{[(2R,3R)-3-METHYL-3,4-DIHYDRO-2H-PYRROL- 2-YL]CARBONYL}-L-LYSINE   Ligand Explorer     External Domain Annotations Hide CATH Classification v3.4.0: 2 Domains - data from CATH   Pfam Classification: 3 Domains - data from Pfam       Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Yanagisawa, T.,  Ishii, R.,  Yokoyama, S.,  RIKEN Structural Genomics/Proteomics Initiative Deposition:   2007-11-08 Release:   2008-04-22     Revision History    Hide Mouse over text for details 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   1.80 R-Value: 0.190 (obs.) R-Free: 0.225 Space Group: P 64 Unit Cell:   Length [Å] Angles [°] a = 104.50 α = 90.00  b = 104.50 β = 90.00  c = 70.85 γ = 120.00