Caspase-3 in Complex with Darpin-3.4_I78S
Schroeder, T., Barandun, J., Grutter, M.G.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
CASPASE-3 | 149 | Homo sapiens | Mutation(s): 0  EC: 3.4.22.56 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P42574 (Homo sapiens) Explore P42574  Go to UniProtKB:  P42574 | |||||
PHAROS:  P42574 GTEx:  ENSG00000164305  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P42574 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
CASPASE-3 | 118 | Homo sapiens | Mutation(s): 0  EC: 3.4.22.56 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P42574 (Homo sapiens) Explore P42574  Go to UniProtKB:  P42574 | |||||
PHAROS:  P42574 GTEx:  ENSG00000164305  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P42574 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
DARPIN-3.4_I78S | E [auth G], F [auth H] | 136 | synthetic construct | Mutation(s): 0  | |
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
MRD Query on MRD | G [auth A], H [auth C], I [auth C] | (4R)-2-METHYLPENTANE-2,4-DIOL C6 H14 O2 SVTBMSDMJJWYQN-RXMQYKEDSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
CSO Query on CSO | A, C | L-PEPTIDE LINKING | C3 H7 N O3 S | CYS |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 98 | α = 90 |
b = 98 | β = 90 |
c = 193.6 | γ = 120 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
XDS | data reduction |
XSCALE | data scaling |
PHASER | phasing |