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PROTEIN KINASE PIM-1 IN COMPLEX WITH SMALL MOLECULE INHIBITOR
2XJ2
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transferase
    Structure Weight: 34727.61
    Molecule: PROTO-ONCOGENE SERINE/THREONINE-PROTEIN KINASE PIM-1
    Polymer: 1 Type: protein Length: 301
    Chains: A
    EC#: 2.7.11.1   
    Fragment: KINASE DOMAIN, RESIDUES 14-313
    Organism: Homo sapiens
    Gene Name: Gene View for PIM1
    UniProtKB: Protein Feature View | Search PDB | P11309  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    1XQZ  CRYSTAL STRUCTURE OF HPIM-1 KINASE AT 2.1 A RESOLUTION 
    1XR1  CRYSTAL STRUCTURE OF HPIM-1 KINASE IN COMPLEX WITH AMP-PNPAT 2.1 A RESOLUTION 
    1XWS  CRYSTAL STRUCTURE OF THE HUMAN PIM1 KINASE DOMAIN 
    1YHS  CRYSTAL STRUCTURE OF PIM-1 BOUND TO STAUROSPORINE 
    1YI3  CRYSTAL STRUCTURE OF PIM-1 BOUND TO LY294002 
    1YI4  STRUCTURE OF PIM-1 BOUND TO ADENOSINE 
    1YWV  CRYSTAL STRUCTURES OF PROTO-ONCOGENE KINASE PIM1: A TARGETOF ABERRANT SOMATIC HYPERMUTATIONS IN DIFFUSE LARGE CELLLYMPHOMA 
    1YXS  CRYSTAL STRUCTURE OF KINASE PIM1 WITH P123M MUTATION 
    1YXT  CRYSTAL STRUCTURE OF KINASE PIM1 IN COMPLEX WITH AMPPNP 
    1YXU  CRYSTAL STRUCTURE OF KINASE PIM1 IN COMPLEX WITH AMP 
    1YXV  CRYSTAL STRUCTURE OF KINASE PIM1 IN COMPLEX WITH 3,4 -DIHYDROXY-1-METHYLQUINOLIN-2(1H)-ONE 
    1YXX  CRYSTAL STRUCTURE OF KINASE PIM1 IN COMPLEX WITH (3E )-3-[(4-HYDROXYPHENYL)IMINO]-1H-INDOL-2(3H)-ONE 
    2BIK  HUMAN PIM1 PHOSPHORYLATED ON SER261 
    2BIL  THE HUMAN PROTEIN KINASE PIM1 IN COMPLEX WITH ITS CONSENSUS PEPTIDE PIMTIDE 
    2BZH  CRYSTAL STRUCTURE OF THE HUMAN PIM1 IN COMPLEX WITH A RUTHENIUM ORGANOMETALLIC LIGAND RU1 
    2BZI  CRYSTAL STRUCTURE OF THE HUMAN PIM1 IN COMPLEX WITH A RUTHENIUM ORGANOMETALLIC LIGAND RU2 
    2BZJ  CRYSTAL STRUCTURE OF THE HUMAN PIM1 IN COMPLEX WITH A RUTHENIUM ORGANOMETALLIC LIGAND RU3 
    2BZK  CRYSTAL STRUCTURE OF THE HUMAN PIM1 IN COMPLEX WITH AMPPNP AND PIMTIDE 
    2C3I  CRYSTAL STRUCTURE OF HUMAN PIM1 IN COMPLEX WITH IMIDAZOPYRIDAZIN I 
    2J2I  CRYSTAL STRUCTURE OF THE HUMAB PIM1 IN COMPLEX WITH LY333531 
    2XIX  PROTEIN KINASE PIM-1 IN COMPLEX WITH FRAGMENT-1 FROM CRYSTALLOGRAPHIC FRAGMENT SCREEN 
    2XIY  PROTEIN KINASE PIM-1 IN COMPLEX WITH FRAGMENT-2 FROM CRYSTALLOGRAPHIC FRAGMENT SCREEN 
    2XIZ  PROTEIN KINASE PIM-1 IN COMPLEX WITH FRAGMENT-3 FROM CRYSTALLOGRAPHIC FRAGMENT SCREEN 
    2XJ0  PROTEIN KINASE PIM-1 IN COMPLEX WITH FRAGMENT-4 FROM CRYSTALLOGRAPHIC FRAGMENT SCREEN 
    2XJ1  PROTEIN KINASE PIM-1 IN COMPLEX WITH SMALL MOLECULE INIBITOR 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    985
    Search 
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    985 C19 H22 N4 O2
    (2E)-3-{3-[6-(4-methyl-1,4-diazepan-1-yl)pyrazin- 2-yl]phenyl}prop-2-enoic acid
    985:2XJ2
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    985
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    985
    IC50: 57 nM (100) - data from BindingDB  
    Kd: 66 nM - data from BindingMOAD  
    Kd: 66 nM - data from PDBbind  
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    SEP
    Search 
    SEP C3 H8 N O6 P SER lPeptideLinking
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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