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STRUCTURE OF 4-(4-TERT-BUTYLBENZYL)-1-(7H-PYRROLO(2,3-D) PYRIMIDIN-4-YL)PIPERIDIN-4-AMINE BOUND TO PKB
2XH5
ENTRY 2XH5 SUPERSEDES 2X37
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transferase
    Structure Weight: 41348.54
    Molecule: RAC-BETA SERINE/THREONINE-PROTEIN KINASE
    Polymer: 1 Type: protein Length: 342
    Chains: A
    EC#: 2.7.11.1   
    Fragment: KINASE CATALYTIC DOMAIN, RESIDUES 146-467
    Mutation: YES
    Details: PIFTIDE SEQUENCE (EEQEMFEDFDYIADW) REPLACES NATURAL PKB SEQUENCE AFTER RESIDUE 464C
    Organism: Homo sapiens
    Gene Name: Gene View for AKT2
    UniProtKB: Protein Feature View | Search PDB | P31751  
    Molecule: GLYCOGEN SYNTHASE KINASE-3 BETA
    Polymer: 2 Type: protein Length: 10
    Chains: C
    EC#: 2.7.11.1    2.7.11.26   
    Fragment: RESIDUES 3-12
    Details: PEPTIDE DERIVED FROM THE KINASE GSK3-BETA
    Organism: Homo sapiens
    Gene Name: Gene View for GSK3B
    UniProtKB: Protein Feature View | Search PDB | P49841  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Spodoptera frugiperda  
    Polymer: 2
    Scientific Name: Synthetic construct (Homo sapiens)   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    1GNG  GLYCOGEN SYNTHASE 3BETA (GSK3) COMPLEX WITH FRATTIDE PEPTIDE 
    1GZK  MOLECULAR MECHANISM FOR THE REGULATION OF PROTEIN KINASE B/AKT BY HYDROPHOBIC MOTIF PHOSPHORYLATION 
    1GZN  STRUCTURE OF PKB KINASE DOMAIN 
    1GZO  STRUCTURE OF PROTEIN KINASE B UNPHOSPHORYLATED 
    1H8F  GLYCOGEN SYNTHASE KINASE 3 BETA. 
    1I09  STRUCTURE OF GLYCOGEN SYNTHASE KINASE-3 ( GSK3B) 
    1J1B  BINARY COMPLEX STRUCTURE OF HUMAN TAU PROTEIN KINASE I WITHAMPPNP 
    1J1C  BINARY COMPLEX STRUCTURE OF HUMAN TAU PROTEIN KINASE I WITHADP 
    1MRV  CRYSTAL STRUCTURE OF AN INACTIVE AKT2 KINASE DOMAIN 
    1MRY  CRYSTAL STRUCTURE OF AN INACTIVE AKT2 KINASE DOMAIN 
    1O6K  STRUCTURE OF ACTIVATED FORM OF PKB KINASE DOMAIN S474D WITH GSK3 PEPTIDE AND AMP-PNP 
    1O6L  CRYSTAL STRUCTURE OF AN ACTIVATED AKT/ PROTEIN KINASE B (PKB-PIF CHIMERA) TERNARY COMPLEX WITH AMP-PNP AND GSK3 PEPTIDE 
    1O9U  GLYCOGEN SYNTHASE KINASE 3 BETA COMPLEXED WITH AXIN PEPTIDE 
    1P6S  SOLUTION STRUCTURE OF THE PLECKSTRIN HOMOLOGY DOMAIN OFHUMAN PROTEIN KINASE B BETA (PKB /AKT) 
    1PYX  GSK-3 BETA COMPLEXED WITH AMP-PNP 
    1Q3D  GSK-3 BETA COMPLEXED WITH STAUROSPORINE 
    1Q3W  GSK-3 BETA COMPLEXED WITH ALSTERPAULLONE 
    1Q41  GSK-3 BETA COMPLEXED WITH INDIRUBIN-3'- MONOXIME 
    1Q4L  GSK-3 BETA COMPLEXED WITH INHIBITOR I-5 
    1Q5K  CRYSTAL STRUCTURE OF GLYCOGEN SYNTHASE KINASE 3 INCOMPLEXED WITH INHIBITOR 
    1R0E  GLYCOGEN SYNTHASE KINASE-3 BETA IN COMPLEX WITH 3-INDOLYL-4-ARYLMALEIMIDE INHIBITOR 
    1UV5  GLYCOGEN SYNTHASE KINASE 3 BETA COMPLEXED WITH 6-BROMOINDIRUBIN-3'-OXIME 
    2JDO  STRUCTURE OF PKB-BETA (AKT2) COMPLEXED WITH ISOQUINOLINE-5-SULFONIC ACID (2-(2-(4- CHLOROBENZYLOXY) ETHYLAMINO)ETHYL)AMIDE 
    2JDR  STRUCTURE OF PKB-BETA (AKT2) COMPLEXED WITH THE INHIBITOR A-443654 
    2JLD  EXTREMELY TIGHT BINDING OF RUTHENIUM COMPLEX TO GLYCOGEN SYNTHASE KINASE 3 
    2UW9  STRUCTURE OF PKB-BETA (AKT2) COMPLEXED WITH 4-(4-CHLORO-PHENYL)-4-(4-(1H-PYRAZOL-4 -YL)-PHENYL)-PIPERIDINE 
    2X39  STRUCTURE OF 4-AMINO-N-(4-CHLOROBENZYL)-1 -(7H-PYRROLO(2,3-D)PYRIMIDIN-4-YL) PIPERIDINE-4-CARBOXAMIDE BOUND TO PKB 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    X37
    Search 
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    X37 C22 H30 N5
    4-(4-tert-butylbenzyl)-1-(7H-pyrrolo[2,3- d]pyrimidin-4-yl)piperidin-4-aminium
    X37:2XH5
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    X37
    Search 
    Download 
    X37
    N/Ain BindingDB
    N/Ain BindingMoad
    IC50: 27 nM - data from PDBbind  
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    TPO
    Search 
    TPO C4 H10 N O6 P THR lPeptideLinking
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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