2W4F

CRYSTAL STRUCTURE OF THE FIRST PDZ DOMAIN OF HUMAN SCRIB1

Structural Biology Knowledgebase: 2W4F SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.3 Å
  • R-Value Free: 0.221
  • R-Value Work: 0.173

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2W4F

Classification: STRUCTURAL PROTEIN

Total Structure Weight: 10401.75

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN LAP4 A 97 Homo sapiens Fragment: RESIDUES 725-815
Gene Name(s): SCRIB Gene View CRIB1 KIAA0147 LAP4 SCRB1 VARTUL
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EDO
Query on EDO

A 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.3 Å
  • R-Value Free: 0.221
  • R-Value Work: 0.173
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 38.22 α = 90.00
b = 41.83 β = 90.00
c = 49.90 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-11-25
  • Released Date: 2008-12-09
  • Deposition author(s): Hozjan, V., Pilka, E.S., Roos, A.K., W Yue, W., Phillips, C., Bray, J., Cooper, C., Salah, E., Elkins, J.M., Muniz, J.R.C., Arrowsmith, C.H., Weigelt, J., Edwards, A.M., Von Delft, F., Bountra, C., Doyle, D.A., Oppermann, U.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4