2VZ6

STRUCTURE OF HUMAN CALCIUM CALMODULIN DEPENDENT PROTEIN KINASE TYPE II ALPHA (CAMK2A) IN COMPLEX WITH INDIRUBIN E804

Structural Biology Knowledgebase: 2VZ6 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.203
  • R-Value Work: 0.163

Literature

Macromolecules
Sequence Display for 2VZ6

Classification: TRANSFERASE

Total Structure Weight: 72243.47

Macromolecule Entities
Molecule Chains Length Organism Details
CALCIUM CALMODULIN DEPENDENT PROTEIN KINASE TYPE II ALPHA CHAIN A, B 313 Homo sapiens EC#: 2.7.11.17 IUBMB
Fragment: KINASE DOMAIN, RESIDUES 13-302
Gene Name(s): CAMK2A Gene View CAMKA KIAA0968
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FEF
Query on FEF

A, B (2Z,3E)-2,3'-BIINDOLE-2',3(1H,1'H)-DIONE 3- {O-[(3R)-3,4-DIHYDROXYBUTYL]OXIME}
C20 H19 N3 O4
RKUMZEVCWKZXFV-YOCZKUTFSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PGO
Query on PGO

A, B S-1,2-PROPANEDIOL
C3 H8 O2
DNIAPMSPPWPWGF-VKHMYHEASA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.203
  • R-Value Work: 0.163
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 76.24 α = 90.00
b = 113.62 β = 90.00
c = 131.87 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-07-30
  • Released Date: 2008-08-26
  • Deposition author(s): Pike, A.C.W., Rellos, P., King, O., Salah, E., Parizotto, E., Fedorov, O., Shrestha, L., Burgess-Brown, N., Roos, A., Murray, J.W., Von Delft, F., Edwards, A., Arrowsmith, C.H., Wikstroem, M., Bountra, C., Knapp, S.

Revision History

  • 2011-08-10
    Type: Biological assembly | Details: REMARK 350
  • 2011-08-10
    Type: Citation | Details: JRNL
  • 2011-07-13
    Type: Version format compliance | Details: Compliance with PDBx exchange dictionary V4
  • 2011-07-13
    Type: Flag residual B-value | Details: Tagged residual B temperature factor