EPHB4 KINASE DOMAIN INHIBITOR COMPLEX
2VX0
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transferase
    Structure Weight: 34433.89
    Molecule: EPHRIN TYPE-B RECEPTOR 4
    Polymer: 1 Type: protein Length: 302
    Chains: A
    EC#: 2.7.10.1   
    Fragment: KINASE DOMAIN, RESIDUES 598-899
    Mutation: YES
    Organism: Homo sapiens
    Gene Names: Gene View for EPHB4 HTK MYK1 TYRO11
    UniProtKB: Protein Feature View | Search PDB | P54760  
     
  •   Structure Validation Hide

    View the full validation report  

     

  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Spodoptera frugiperda  
     
  •   Related PDB Entries Hide
    Identifier Details
    2BBA   CRYSTAL STRUCTURE AND THERMODYNAMIC CHARACTERIZATION OF THEEPHB4 RECEPTOR IN COMPLEX WITH AN EPHRIN-B2 ANTAGONISTPEPTIDE REVEALS THE DETERMINANTS FOR RECEPTOR SPECIFICITY 
    2VWU   EPHB4 KINASE DOMAIN INHIBITOR COMPLEX 
    2VWV   EPHB4 KINASE DOMAIN INHIBITOR COMPLEX 
    2VWW   EPHB4 KINASE DOMAIN INHIBITOR COMPLEX 
    2VWX   EPHB4 KINASE DOMAIN INHIBITOR COMPLEX 
    2VWY   EPHB4 KINASE DOMAIN INHIBITOR COMPLEX 
    2VWZ   EPHB4 KINASE DOMAIN INHIBITOR COMPLEX 
    2VX1   EPHB4 KINASE DOMAIN INHIBITOR COMPLEX 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    7X7
    Search 
    Download 
    7X7 C21 H20 Cl N5 O3
    N'-(5-CHLORO-1,3-BENZODIOXOL-4-YL)-N-(3-MORPHOLIN- 4-YLPHENYL)PYRIMIDINE-2,4-DIAMINE
    7X7:2VX0
    MG
    Search 
    Download 
    MG Mg
    MAGNESIUM ION
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    7X7
    Search 
    Download 
    7X7
    IC50: 580 nM (99) - data from BindingDB  
    IC50: 580 nM - data from BindingMOAD  
    IC50: 580 nM - data from PDBbind  
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
Downloadable viewers: