RCSB Protein Data Bank - RCSB PDB - 2VN9 Structure Summary

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CRYSTAL STRUCTURE OF HUMAN CALCIUM CALMODULIN DEPENDENT PROTEIN KINASE II DELTA ISOFORM 1, CAMKD

DOI:10.2210/pdb2vn9/pdb

2VN9

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Primary Citation

Related Citations in PDB Entry (REMARK 1) Hide

Molecular Description

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Classification:	Transferase
Structure Weight:	69923.91

Molecule:

CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE TYPE II DELTA CHAIN

Polymer:

Type:

protein

Length:

301

Chains:

A, B

EC#:

Fragment:

KINASE DOMAIN, RESIDUES 11-309

Organism

Homo sapiens

Gene Names

CAMK2D CAMKD

UniProtKB:

| | Q13557

Source

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Polymer: 1

Scientific Name:

Homo sapiens

Taxonomy

Common Name:

Human

Expression System:

Escherichia coli

Ligand Chemical Component

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Identifier		Formula	Name	Interactions
CL Search Download		Cl	CHLORIDE ION		Ligand Explorer
EPE Search Download		C₈ H₁₈ N₂ O₄ S	4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID		Ligand Explorer
GVD Search Download	$<div style='width:300px;min-height:360px;text-align:center;'>Show Details<img src='/pdb/images/GVD_320.gif' width='300' alt='' /> <b>Ligand Name:</b> [4-({4-[(5-CYCLOPROPYL-1H-PYRAZOL-3-YL)AMINO]QUINAZOLIN- 2-YL}IMINO)CYCLOHEXA-2,5-DIEN-1-YL]ACETONITRILE <br /><br /> <b>Synonyms:</b> n/a </div>$	C₂₂ H₁₉ N₇	[4-({4-[(5-CYCLOPROPYL-1H-PYRAZOL-3-YL)AMINO]QUINAZOLIN- 2-YL}IMINO)CYCLOHEXA-2,5-DIEN-1-YL]ACETONITRILE		Ligand Explorer
PO4 Search Download		O₄ P	PHOSPHATE ION		Ligand Explorer

External Domain Annotations Hide
CATH Classification v3.4.0: 2 Domains - data from CATH

Pfam Classification: 2 Domains - data from Pfam
Structural Biology Knowledgebase Data Hide

Data in orange boxes are gathered from external resources (when available).

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Biological Assembly 1

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Biological assembly 1 assigned by authors and generated by PISA (software)

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Deposition Summary

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Authors: Roos, A.K., Rellos, P., Salah, E., Pike, A.C.W., Fedorov, O., Pilka, E.S., Von Delft, F., Arrowsmith, C.H., Weigelt, J., Edwards, A., Bountra, C., Knapp, S.

Deposition:	2008-01-31
Release:	2008-02-26
Last Modified (REVDAT):	2011-08-10

Revision History Hide

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2011-08-10
Citation

2011-08-10
Biological assembly

2011-08-10
Non-polymer description

2011-07-13
Flag residual B-value

2011-07-13
Version format compliance

Experimental Details

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Method: X-RAY DIFFRACTION
Exp. Data:
Structure Factors
EDS

Unit Cell:
	Length [Å]	Angles [°]
	a = 68.28	α = 90.00
	b = 68.28	β = 90.00
	c = 313.45	γ = 120.00