2V91

STRUCTURE OF STRICTOSIDINE SYNTHASE IN COMPLEX WITH STRICTOSIDINE

Structural Biology Knowledgebase: 2V91 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.01 Å
  • R-Value Free: 0.235
  • R-Value Work: 0.192

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2V91

Classification: LYASE

Total Structure Weight: 68453.05

Macromolecule Entities
Molecule Chains Length Organism Details
STRICTOSIDINE SYNTHASE A, B 302 Rauvolfia serpentina EC#: 4.3.3.2 IUBMB
Fragment: RESIDUES 32-333
Details: COMPLEX WITH STRICTOSIDINE
Gene Name(s): STR1

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
S55
Query on S55

A, B METHYL (2S,3R,4S)-3-ETHYL-2-(BETA-D-GLUCOPYRANOSYLOXY)- 4-[(1S)-2,3,4,9-TETRAHYDRO-1H-BETA-CARBOLIN- 1-YLMETHYL]-3,4-DIHYDRO-2H-PYRAN-5-CARBOXYLATE
C27 H36 N2 O9
HZZMXWZOTXPILK-NTXHKPOFSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.01 Å
  • R-Value Free: 0.235
  • R-Value Work: 0.192
  • Space Group: H 3
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 150.18 α = 90.00
b = 150.18 β = 90.00
c = 121.71 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-08-16
  • Released Date: 2008-09-16
  • Deposition author(s): Loris, E.A., Panjikar, S., Ruppert, M., Barleben, L., Unger, M., Stoeckigt, J.

Revision History

  • 2011-07-13
    Type: Flag residual B-value | Details: Tagged residual B temperature factor
  • 2011-07-13
    Type: Version format compliance | Details: Compliance with PDBx exchange dictionary V4