POP-OUT | CLOSE
Selectivity of Nucleoside Triphosphate Incorporation Opposite 1,N2-Propanodeoxyguanosine (PdG) by the Sulfolobus solfataricus DNA Polymerase Dpo4 Polymerase
DOI:10.2210/pdb2r8g/pdb   NDB ID: PD1039
2R8G
Primary Citation
 
 
  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Molecular Description Hide
    Classification: Replication , Transferase/dna
    Structure Weight: 50723.23
    Molecule: 5'-D(*DGP*DGP*DGP*DGP*DGP*DAP*DAP*DGP*DGP*DAP*DTP*DTP*DT)-3'
    Polymer: 1 Type: dna Length: 13
    Chains: P
    Molecule: 5'-D(*DTP*DCP*DAP*DCP*(P)P*DGP*DAP*DAP*DAP*DTP*DCP*DCP*DTP*DTP*DCP*DCP*DCP*DCP*DC)-3'
    Polymer: 2 Type: dna Length: 19
    Chains: T
    Molecule: DNA polymerase IV
    Polymer: 3 Type: protein Length: 352
    Chains: A
    EC#: 2.7.7.7   
    Mutation: R332A
    Organism Sulfolobus solfataricus
    Gene Names dbh dpo4 SSO2448
    UniProtKB:   Protein Feature View | Search PDB | Q97W02  
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 3
    Scientific Name: Sulfolobus solfataricus   Taxonomy   Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    2R8H   
    2R8I   
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name Interactions
    CA
    Search 
    Download      		CA Ca
    CALCIUM ION
    DGT
    Search 
    Download      		DGT C10 H16 N5 O13 P3
    2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE
    		DGT:2R8G
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    P
    Search      		P C13 H18 N5 O7 P DG dnaLinking
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: PD1039
     
 
Data in orange boxes are gathered from external resources (when available).
Reset Layout
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
Downloadable viewers: