2PWF

Crystal structure of the MutB D200A mutant in complex with glucose

Structural Biology Knowledgebase: 2PWF SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.238
  • R-Value Work: 0.198

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2PWF

Classification: Isomerase

Total Structure Weight: 255946.61

Macromolecule Entities
Molecule Chains Length Organism Details
Sucrose isomerase A, B, C, D 556 Pseudomonas mesoacidophila EC#: 5.4.99.11 IUBMB
Mutation: D200A
Gene Name(s): mutB

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BGC
Query on BGC

A, B, C, D BETA-D-GLUCOSE
C6 H12 O6
WQZGKKKJIJFFOK-VFUOTHLCSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A, B, C, D CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.238
  • R-Value Work: 0.198
  • Space Group: P 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 63.98 α = 81.77
b = 85.81 β = 81.43
c = 122.14 γ = 89.94

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-05-11
  • Released Date: 2007-06-26
  • Deposition author(s): Ravaud, S., Robert, X., Haser, R., Aghajari, N.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4