Archaeal RNA polymerase from Sulfolobus solfataricus
2PMZ
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Translation , Transferase
    Structure Weight: 756494.52
    Molecule: DNA-directed RNA polymerase subunit A
    Polymer: 1 Type: protein Length: 880
    Chains: A, Q
    EC#: 2.7.7.6   
    Organism: Sulfolobus solfataricus P2
    Gene Names: rpoA1 SSO0225
    UniProtKB: Protein Feature View | Search PDB | Q980R2  
    Molecule: DNA-directed RNA polymerase subunit A"
    Polymer: 2 Type: protein Length: 392
    Chains: C, G
    EC#: 2.7.7.6   
    Organism: Sulfolobus solfataricus P2
    Gene Names: rpoA2 SSO0223
    UniProtKB: Protein Feature View | Search PDB | P58192  
    Molecule: DNA-directed RNA polymerase subunit B
    Polymer: 3 Type: protein Length: 1124
    Chains: B, R
    EC#: 2.7.7.6   
    Organism: Sulfolobus solfataricus P2
    Gene Names: rpoB1 SSO0227
    UniProtKB: Protein Feature View | Search PDB | Q980R1  
    Molecule: DNA-directed RNA polymerase subunit D
    Polymer: 4 Type: protein Length: 265
    Chains: D, S
    EC#: 2.7.7.6   
    Organism: Sulfolobus solfataricus P2
    Gene Names: rpoD SSO0071 C04_051
    UniProtKB: Protein Feature View | Search PDB | P95989  
    Molecule: DNA-directed RNA polymerase subunit E
    Polymer: 5 Type: protein Length: 180
    Chains: E, T
    EC#: 2.7.7.6   
    Organism: Sulfolobus solfataricus P2
    Gene Names: rpoE1 SSO0415
    UniProtKB: Protein Feature View | Search PDB | Q980A3  
    Molecule: DNA-directed RNA polymerase subunit F
    Polymer: 6 Type: protein Length: 113
    Chains: F, U
    EC#: 2.7.7.6   
    Organism: Sulfolobus solfataricus P2
    Gene Name: ORF-c20_042
    UniProtKB: Protein Feature View | Search PDB | Q9UXD9  
    Molecule: DNA-directed RNA polymerase subunit H
    Polymer: 7 Type: protein Length: 84
    Chains: H, V
    EC#: 2.7.7.6   
    Organism: Sulfolobus solfataricus P2
    Gene Names: rpoH SSO5468
    UniProtKB: Protein Feature View | Search PDB | Q980Q9  
    Molecule: DNA-directed RNA polymerase subunit K
    Polymer: 8 Type: protein Length: 95
    Chains: K, W
    EC#: 2.7.7.6   
    Organism: Sulfolobus solfataricus P2
    Gene Names: rpoK SSO6768
    UniProtKB: Protein Feature View | Search PDB | Q97ZJ9  
    Molecule: DNA-directed RNA polymerase subunit L
    Polymer: 9 Type: protein Length: 92
    Chains: L, X
    EC#: 2.7.7.6   
    Organism: Sulfolobus solfataricus P2
    Gene Names: rpoL SSO5577
    UniProtKB: Protein Feature View | Search PDB | Q980K0  
    Molecule: DNA-directed RNA polymerase subunit N
    Polymer: 10 Type: protein Length: 66
    Chains: N, Y
    EC#: 2.7.7.6   
    Organism: Sulfolobus solfataricus P2
    Gene Names: rpoN SSO5140
    UniProtKB: Protein Feature View | Search PDB | Q980Z8  
    Molecule: DNA-directed RNA polymerase subunit P
    Polymer: 11 Type: protein Length: 48
    Chains: P, Z
    EC#: 2.7.7.6   
    Organism: Sulfolobus solfataricus P2
    Gene Names: rpoP SSO5865
    UniProtKB: Protein Feature View | Search PDB | Q97ZX7  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Sulfolobus solfataricus   Taxonomy    
    Polymer: 2
    Scientific Name: Sulfolobus solfataricus   Taxonomy    
    Polymer: 3
    Scientific Name: Sulfolobus solfataricus   Taxonomy    
    Polymer: 4
    Scientific Name: Sulfolobus solfataricus   Taxonomy    
    Polymer: 5
    Scientific Name: Sulfolobus solfataricus   Taxonomy    
    Polymer: 6
    Scientific Name: Sulfolobus solfataricus   Taxonomy    
    Polymer: 7
    Scientific Name: Sulfolobus solfataricus   Taxonomy    
    Polymer: 8
    Scientific Name: Sulfolobus solfataricus   Taxonomy    
    Polymer: 9
    Scientific Name: Sulfolobus solfataricus   Taxonomy    
    Polymer: 10
    Scientific Name: Sulfolobus solfataricus   Taxonomy    
    Polymer: 11
    Scientific Name: Sulfolobus solfataricus   Taxonomy    
     
  •   Ligand Chemical Component Hide
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly 1       
Biological assembly 1 assigned by authors
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  •   MyPDB Personal Annotations Hide
     
  •   Deposition Summary Hide
    Authors:   Murakami, K.S.

    Deposition:   2007-04-23
    Release:   2008-02-12
    Last Modified (REVDAT):   2011-07-13
     
  •   Revision History    Hide
    Mouse over text for details
    2011-07-13
    Version format compliance
    2011-07-13
    Source and taxonomy
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   3.40
    R-Value: 0.274 (obs.)
    R-Free: 0.343
    Space Group: P 1 21 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 125.82 α = 90.00 
    b = 201.24 β = 100.92 
    c = 196.05 γ = 90.00