2O55

Crystal Structure of a putative glycerophosphodiester phosphodiesterase from Galdieria sulphuraria


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.81 Å
  • R-Value Free: 0.255
  • R-Value Work: 0.192

Literature

Macromolecules
Sequence Display for 2O55

Classification: STRUCTURAL GENOMICS UNKNOWN FUNCTION

Total Structure Weight: 30121.47

Macromolecule Entities
Molecule Chains Length Organism Details
putative glycerophosphodiester phosphodiesterase A 258 Galdieria sulphuraria

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.81 Å
  • R-Value Free: 0.255
  • R-Value Work: 0.192
  • Space Group: P 31 2 1

Unit Cell:

Length (Å) Angle (°)
a = 102.43 α = 90.00
b = 102.43 β = 90.00
c = 51.71 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-12-05
  • Released Date: 2006-12-19
  • Deposition author(s): Mccoy, J.G., Wesenberg, G.E., Phillips Jr., G.N., Bitto, E., Bingman, C.A., Center for Eukaryotic Structural Genomics (CESG)

Revision History

  • 2008-05-01
    Type: Version format compliance
  • 2011-07-13
    Type: Advisory, Version format compliance