NMR solution structure of the d3'-hairpin from the Sc.ai5gamma group II intron including the EBS1:dIBS1 RNA:DNA hybrid
DOI:10.2210/pdb2m1v/pdb   NDB ID: 2M1V
Primary Citation
  •   Molecular Description Hide
    Classification: DNA/RNA
    Structure Weight: 11415.04
    Molecule: RNA (29-MER)
    Polymer: 1 Type: rna Length: 29
    Chains: A
    Fragment: d3'EBS1
    Organism: Saccharomyces cerevisiae
    Molecule: DNA_(5'-D(*CP*AP*GP*TP*GP*TP*C)-3')_
    Polymer: 2 Type: dna Length: 7
    Chains: B
    Fragment: dIBS1
    Organism: synthetic construct

  •   Related Citations in PDB Entry (REMARK 1) Hide
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct (Saccharomyces cerevisiae)   Taxonomy    
    Polymer: 2
    Scientific Name: Synthetic construct (synthetic construct)   Taxonomy    
  •   Related PDB Entries Hide
    Identifier Details
  •   Structural Biology Knowledgebase Data Hide
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:2M1V
Data in orange boxes are gathered from external resources (when available).
Structure Image
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  •   Deposition Summary Hide
    Authors:   Skilandat, M.,  Sigel, R.K.O.

    Deposition:   2012-12-07
    Release:   2014-06-11
    Last Modified (REVDAT):   2014-08-06
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  •   Experimental Details Hide
    NMR Ensemble
    Conformers Calculated:     200
    Conformers Submitted:     18
    Selection Criteria: structures with the lowest energy
    NMR Refine
    Method: SOLUTION NMR