2JLD

EXTREMELY TIGHT BINDING OF RUTHENIUM COMPLEX TO GLYCOGEN SYNTHASE KINASE 3

Structural Biology Knowledgebase: 2JLD SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.227
  • R-Value Work: 0.190

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2JLD

Classification: TRANSFERASE

Total Structure Weight: 95421.06

Macromolecule Entities
Molecule Chains Length Organism Details
GLYCOGEN SYNTHASE KINASE-3 BETA A, B 420 Homo sapiens EC#: 2.7.11.26 IUBMB
Gene Name(s): GSK3B Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
PEPTIDE (ALA-GLY-GLY-ALA-ALA-ALA-ALA-ALA) E 8 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
AG1
Query on AG1

A, B RUTHENIUM PYRIDOCARBAZOLE
C27 H17 F N4 O7 Ru
JXIQPKSJUQUSLH-GXYYWVIJSA-M
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
AG1 N/A in BindingDB
IC50: 0.04 nM  BindingMOAD
IC50: <0.04 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.227
  • R-Value Work: 0.190
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 83.04 α = 90.00
b = 86.11 β = 90.00
c = 177.40 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-09-08
  • Released Date: 2008-12-09
  • Deposition author(s): Atilla-Gokcumen, G.E., Pagano, N., Streu, C., Maksimoska, J., Filippakopoulos, P., Knapp, S., Meggers, E.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4