POP-OUT | CLOSE
CRYSTAL STRUCTURE OF EGFR KINASE DOMAIN IN COMPLEX WITH AN IRREVERSIBLE INHIBITOR 34-JAB
2J5F
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transferase
    Structure Weight: 37673.62
    Molecule: EPIDERMAL GROWTH FACTOR RECEPTOR
    Polymer: 1 Type: protein Length: 327
    Chains: A
    EC#: 2.7.10.1   
    Fragment: KINASE DOMAIN, RESIDUES 696-1022
    Organism Homo sapiens
    Gene Names EGFR ERBB ERBB1 HER1
    UniProtKB:   Protein Feature View | Search PDB | P00533  
     
  •   Structure Validation Hide

    Download full validation report    

     
  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Spodoptera frugiperda  
     
  •   Related PDB Entries Hide
    Identifier Details
    1DNQ  THEORETICAL MODEL OF THE FIRST AND SECOND DOMAINS OF THE HUMAN EPIDERMAL GROWTH FACTOR RECEPTOR ECTODOMAIN 
    1DNR  THEORETICAL MODEL OF THE THIRD AND FOURTH DOMAINS OF THE HUMAN EPIDERMAL GROWTH FACTOR RECEPTOR ECTODOMAIN 
    1IVO  CRYSTAL STRUCTURE OF THE COMPLEX OF HUMAN EPIDERMAL GROWTHFACTOR AND RECEPTOR EXTRACELLULAR DOMAINS. 
    1M14  TYROSINE KINASE DOMAIN FROM EPIDERMAL GROWTH FACTOR RECEPTOR 
    1M17  EPIDERMAL GROWTH FACTOR RECEPTOR TYROSINE KINASE DOMAINWITH 4-ANILINOQUINAZOLINE INHIBITOR ERLOTINIB 
    1MOX  CRYSTAL STRUCTURE OF HUMAN EPIDERMAL GROWTH FACTOR RECEPTOR(RESIDUES 1-501) IN COMPLEX WITH TGF-ALPHA 
    1NQL  STRUCTURE OF THE EXTRACELLULAR DOMAIN OF HUMAN EPIDERMALGROWTH FACTOR (EGF) RECEPTOR IN AN INACTIVE (LOW PH)COMPLEX WITH EGF. 
    1XKK  EGFR KINASE DOMAIN COMPLEXED WITH A QUINAZOLINE INHIBITOR-GW572016 
    1YY9  STRUCTURE OF THE EXTRACELLULAR DOMAIN OF THE EPIDERMALGROWTH FACTOR RECEPTOR IN COMPLEX WITH THE FAB FRAGMENT OFCETUXIMAB/ERBITUX/ IMC-C225 
    1Z9I  A STRUCTURAL MODEL FOR THE MEMBRANE-BOUND FORM OF THEJUXTAMEMBRANE DOMAIN OF THE EPIDERMAL GROWTH FACTORRECEPTOR 
    2GS2  CRYSTAL STRUCTURE OF THE ACTIVE EGFR KINASE DOMAIN 
    2GS7  CRYSTAL STRUCTURE OF THE INACTIVE EGFR KINASE DOMAIN INCOMPLEX WITH AMP-PNP 
    2ITN  CRYSTAL STRUCTURE OF EGFR KINASE DOMAIN G719S MUTATION IN COMPLEX WITH AMP-PNP 
    2ITO  CRYSTAL STRUCTURE OF EGFR KINASE DOMAIN G719S MUTATION IN COMPLEX WITH IRESSA 
    2ITP  CRYSTAL STRUCTURE OF EGFR KINASE DOMAIN G719S MUTATION IN COMPLEX WITH AEE788 
    2ITQ  CRYSTAL STRUCTURE OF EGFR KINASE DOMAIN G719S MUTATION IN COMPLEX WITH AFN941 
    2ITT  CRYSTAL STRUCTURE OF EGFR KINASE DOMAIN L858R MUTATION IN COMPLEX WITH AEE788 
    2ITU  CRYSTAL STRUCTURE OF EGFR KINASE DOMAIN L858R MUTATION IN COMPLEX WITH AFN941 
    2ITV  CRYSTAL STRUCTURE OF EGFR KINASE DOMAIN L858R MUTATION IN COMPLEX WITH AMP-PNP 
    2ITW  CRYSTAL STRUCTURE OF EGFR KINASE DOMAIN IN COMPLEX WITH AFN941 
    2ITX  CRYSTAL STRUCTURE OF EGFR KINASE DOMAIN IN COMPLEX WITH AMP-PNP 
    2ITY  CRYSTAL STRUCTURE OF EGFR KINASE DOMAIN IN COMPLEX WITH IRESSA 
    2ITZ  CRYSTAL STRUCTURE OF EGFR KINASE DOMAIN L858R MUTATION IN COMPLEX WITH IRESSA 
    2J5E  CRYSTAL STRUCTURE OF EGFR KINASE DOMAIN IN COMPLEX WITH AN IRREVERSIBLE INHIBITOR 13- JAB 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    DJK
    Search 
    Download 
    DJK C17 H13 Br N4 O
    N-[4-(3-BROMO-PHENYLAMINO)-QUINAZOLIN-6-YL]- ACRYLAMIDE
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    DJK
    Search 
    Download 
    DJK
    IC50: 0.08 - 152 nM (99 - 100) - data from BindingDB  
    N/Ain BindingMoad
    N/Ain PDBbind
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PQS (software)
Downloadable viewers:
 
 
 
  •   MyPDB Personal Annotations Hide
     
  •   Deposition Summary Hide
    Authors:   Yun, C.-H.,  Eck, M.J.

    Deposition:   2006-09-14
    Release:   2007-02-27
    Last Modified (REVDAT):   2009-02-24
     
  •   Revision History    Hide
    Mouse over text for details
    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   3.00
    R-Value: 0.194 (obs.)
    R-Free: 0.246
    Space Group: I 2 3
    Unit Cell:
      Length [Å] Angles [°]
    a = 145.88 α = 90.00 
    b = 145.88 β = 90.00 
    c = 145.88 γ = 90.00