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Crystal structure of a photoactivated rhodopsin
 
 
DOI:10.2210/pdb2i37/pdb
2I37
 
Primary Citation
spinning wheel
 
 
  •  
    Move Section Molecular Description Hide
    Classification: Membrane Protein
    Structure Weight: 120733.73
     
    Molecule:Rhodopsin
    Polymer:1Type:polypeptide(L)Length:349
    Chains:A, B, C
     
     
  •  
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    Polymer: 1
    Scientific Name: Bos taurus Go to NCBI Taxonomy entry Common Name: Cattle  
    Polymer: 2
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
    Polymer: 3
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
    Polymer: 4
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
    Polymer: 5
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
    Polymer: 6
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
     
     
  •  
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    Id Details
    2I35  2I35 is the crystal structure of rhombohedral form of ground-state rhodopsin determined at 3.80 angstrom resolution 
    2I36  2I36 is the crystal structure of trigonal form of ground-state rhodopsin determined at 4.10 angstrom resolution 
     
     
  •  
    Move Section Ligand Chemical Component Hide
    Identifier Name Formula Interaction View Links
    BMA     BETA-D-MANNOSE C6 H12 O6 3DLigand Explorer Link out to Ligand Expos:BMA Link out to SuperLigands:BMA Link out to SuperHapten:BMA
    MAN     ALPHA-D-MANNOSE C6 H12 O6 3DLigand Explorer Link out to Ligand Expos:MAN Link out to SuperLigands:MAN Link out to SuperHapten:MAN
    NAG     N-ACETYL-D-GLUCOSAMINE C8 H15 N O6 3DLigand Explorer Link out to Ligand Expos:NAG Link out to SuperLigands:NAG Link out to SuperHapten:NAG
    NDG     2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE C8 H15 N O6 3DLigand Explorer Link out to Ligand Expos:NDG Link out to SuperLigands:NDG Link out to SuperHapten:NDG
     
     
  •  
    Move Section Modified Residues Hide
    Identifier Name Formula Interaction View Links
    ACE ACETYL GROUP(type: nonPolymer) C2 H4 O 3D Ligand Explorer Link out to Ligand Expos:ACE Link out to SuperLigands:ACE Link out to SuperHapten:ACE 2D
     
     
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Biological assembly 1 assigned by authors