2HWH

HCV NS5B allosteric inhibitor complex

Structural Biology Knowledgebase: 2HWH SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.277
  • R-Value Work: 0.233

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2HWH

Classification: Transferase

Total Structure Weight: 128752.66

Macromolecule Entities
Molecule Chains Length Organism Details
RNA-directed RNA polymerase (NS5B) (p68) A, B 576 Hepatitis c virus EC#: 2.7.7.48 IUBMB
Fragment: HCV NS5B
Mutation: T329V, V338A, R544Q
Gene Name(s):

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
RNA
Query on RNA

A, B 4-METHYL-N-{(5E)-5-[(5-METHYL-2-FURYL)METHYLENE]- 4-OXO-4,5-DIHYDRO-1,3-THIAZOL-2-YL}BENZENESULFONAMIDE
5-DIHYDROTHIAZOL-2-YL)BENZENESULFONAMIDE, (Synonym)
C16 H14 N2 O4 S2
MXAPQGDBWFYKKX-ZROIWOOFSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
RNA N/A in BindingDB
IC50: 2000 nM  BindingMOAD
IC50: 2000 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.277
  • R-Value Work: 0.233
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 85.37 α = 90.00
b = 105.71 β = 90.00
c = 126.59 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-08-01
  • Released Date: 2006-11-07
  • Deposition author(s): Yao, N.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4