Structures of the noncovalent complexes of human and bovine prothrombin fragment 2 with human ppack-thrombin DOI:10.2210/pdb2hpq/pdb

2HPQ   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Biological Assembly (gz) (A)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Hydrolase/hydrolase Inhibitor Structure Weight: 43020.64 Molecule: ALPHA-THROMBIN (SMALL SUBUNIT) Polymer: 1 Type: protein Length: 36 Chains: L EC#: 3.4.21.5    Organism Homo sapiens Gene Name F2 UniProtKB:   Protein Feature View | Search PDB | P00734     Molecule: ALPHA-THROMBIN (LARGE SUBUNIT) Polymer: 2 Type: protein Length: 259 Chains: H EC#: 3.4.21.5    Organism Homo sapiens Gene Name F2 UniProtKB:   Protein Feature View | Search PDB | P00734   Molecule: Prothrombin Polymer: 3 Type: protein Length: 79 Chains: P EC#: 3.4.21.5    Fragment: Activation peptide fragment 2 Organism Homo sapiens Gene Name F2 UniProtKB:   Protein Feature View | Search PDB | P00734       Source Hide Polymer: 1 Scientific Name: Homo sapiens   Taxonomy   Common Name: Human   Polymer: 2 Scientific Name: Homo sapiens   Taxonomy   Common Name: Human   Polymer: 3 Scientific Name: Homo sapiens   Taxonomy   Common Name: Human       Related PDB Entries Hide Identifier Details 2HPP        Biologically Interesting Molecules (BIRD) Hide Identifier Image Name Type Class Chain ID   PRD_000021 Search  D-Phe-Pro-Arg chloromethylketone (PPACK) Peptide-like Inhibitor H   Ligand Explorer     Ligand Chemical Component Hide Identifier Formula Name Interactions 0G7 Search  Download  C21 H31 Cl N6 O3 D-phenylalanyl-N-[(3S)-6-carbamimidamido- 1-chloro-2-oxohexan-3-yl]-L-prolinamide   Ligand Explorer     External Domain Annotations Hide SCOP Classification v1.75: 2 Domains - data from SCOP   CATH Classification v3.4.0: 3 Domains - data from CATH   Pfam Classification: 3 Domains - data from Pfam       Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Tulinsky, A.,  Padmanabhan, K. Deposition:   1993-04-28 Release:   1994-01-31 Last Modified (REVDAT):   2011-07-13     Revision History    Hide Mouse over text for details 2013-02-27 Other 2011-07-13 Atom nomenclature 2011-07-13 Binding sites and description 2011-07-13 Non-polymer description 2011-07-13 Function and keywords 2011-07-13 Linkage 2011-07-13 Sequence database correspondence 2011-07-13 Polymer description 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data: N/A Resolution[Å]:   3.30 R-Value: 0.155 (obs.) R-Free: n/a Space Group: P 41 21 2 Unit Cell:   Length [Å] Angles [°] a = 123.60 α = 90.00  b = 123.60 β = 90.00  c = 101.10 γ = 90.00      Molecule of the Month Hide Thrombin Trypsin Serpins Tissue Factor Fibrin