The crystal structure of the B. subtilis YphC GTPase in complex with GDP
2HJG
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase
    Structure Weight: 50343.59
    Molecule: GTP-binding protein engA
    Polymer: 1 Type: protein Length: 436
    Chains: A
    Organism: Bacillus subtilis
    Gene Names: der engA yphC BSU22840
    UniProtKB: Protein Feature View | Search PDB | P50743  
     
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  •   Source Hide
    Polymer: 1
    Scientific Name: Bacillus subtilis   Taxonomy   Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    1MKY   Structural analysis of the domain interactions in Der, a switch protein containing two GTPase domains 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    GDP
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    GDP C10 H15 N5 O11 P2
    GUANOSINE-5'-DIPHOSPHATE
    GDP:2HJG
    ZN
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    ZN Zn
    ZINC ION
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    MSE
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    MSE C5 H11 N O2 Se MET lPeptideLinking
     
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Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Muench, S.P.,  Xu, L.,  Sedelnikova, S.E.,  Rice, D.W

    Deposition:   2006-06-30
    Release:   2006-08-08
    Last Modified (REVDAT):   2009-02-24
     
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.50
    R-Value: 0.218 (obs.)
    R-Free: 0.274
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 62.71 α = 90.00 
    b = 65.04 β = 90.00 
    c = 110.61 γ = 90.00