2HBJ

Structure of the yeast nuclear exosome component, Rrp6p, reveals an interplay between the active site and the HRDC domain

Structural Biology Knowledgebase: 2HBJ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.292
  • R-Value Work: 0.232

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2HBJ

Classification: HYDROLASE GENE REGULATION

Total Structure Weight: 47675.66

Macromolecule Entities
Molecule Chains Length Organism Details
Exosome complex exonuclease RRP6 A 410 Saccharomyces cerevisiae EC#: 3.1.13 IUBMB
Fragment: Rrp6p central fragment, residues 129-536
Mutation: Y361A
Gene Name(s): RRP6 UNC733 YOR001W
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.292
  • R-Value Work: 0.232
  • Space Group: P 31 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 110.14 α = 90.00
b = 110.14 β = 90.00
c = 80.17 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-06-14
  • Released Date: 2006-07-25
  • Deposition author(s): Midtgaard, S.F., Assenholt, J., Jonstrup, A.T., Van, L.B., Jensen, T.H., Brodersen, D.E.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4