2GK9

Human Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.80 Å
  • R-Value Free: 0.297 
  • R-Value Work: 0.254 
  • R-Value Observed: 0.261 

wwPDB Validation   3D Report Full Report


This is version 1.4 of the entry. See complete history



Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
phosphatidylinositol-4-phosphate 5-kinase, type II, gamma
A, B, C, D
392Homo sapiensMutation(s): 0 
Gene Names: PIP5K2C
EC: 2.7.1.68
UniProt & NIH Common Fund Data Resources
Find proteins for Q8TBX8 (Homo sapiens)
Explore Q8TBX8 
Go to UniProtKB:  Q8TBX8
PHAROS:  Q8TBX8
GTEx:  ENSG00000166908 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ8TBX8
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.80 Å
  • R-Value Free: 0.297 
  • R-Value Work: 0.254 
  • R-Value Observed: 0.261 
  • Space Group: P 43
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 95.39α = 90
b = 95.39β = 90
c = 189.11γ = 90
Software Package:
Software NamePurpose
MAR345data collection
XDSdata reduction
MOLREPphasing
SHELXL-97refinement
XDSdata scaling

Structure Validation

View Full Validation Report



Entry History 

Revision History  (Full details and data files)

  • Version 1.0: 2006-05-02
    Type: Initial release
  • Version 1.1: 2008-05-01
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2017-10-18
    Changes: Refinement description
  • Version 1.4: 2024-02-14
    Changes: Data collection, Database references, Derived calculations