2FX6

bovine trypsin complexed with 2-aminobenzamidazole

Structural Biology Knowledgebase: 2FX6 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.57 Å
  • R-Value Free: 0.215
  • R-Value Work: 0.202

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2FX6

Classification: HYDROLASE

Total Structure Weight: 23497.63

Macromolecule Entities
Molecule Chains Length Organism Details
Trypsin A 223 Bos taurus EC#: 3.4.21.4 IUBMB
Fragment: Cationic trypsin, residues 21-243
Gene Name(s):

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
270
Query on 270

A 2H-BENZOIMIDAZOL-2-YLAMINE
ZK-800270 (Synonym)
C7 H7 N3
DERVZEOWPBCBHO-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
270 N/A in BindingDB
Ki: 200000 nM  BindingMOAD
Ki: 200000 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.57 Å
  • R-Value Free: 0.215
  • R-Value Work: 0.202
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 63.71 α = 90.00
b = 63.20 β = 90.00
c = 69.50 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-02-03
  • Released Date: 2006-02-14
  • Deposition author(s): Katz, B.A.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4