2FOV

Human Carbonic Anhydrase II complexed with two-prong inhibitors

Structural Biology Knowledgebase: 2FOV SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.15 Å
  • R-Value Free: 0.187
  • R-Value Work: 0.143

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2FOV

Classification: LYASE

Total Structure Weight: 30515.64

Macromolecule Entities
Molecule Chains Length Organism Details
Carbonic Anhydrase II A 260 Homo sapiens EC#: 4.2.1.1 IUBMB
Mutation: C206X
Gene Name(s): CA2 Gene View

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
B30
Query on B30

A {2,2'-[(2-{[4-(AMINOSULFONYL)BENZOYL]AMINO}ETHYL)IMINO]DIACETATO(2- )-KAPPAO}COPPER
C13 H15 Cu N3 O7 S
IZSCVVCMRVDVFM-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CU
Query on CU

A COPPER (II) ION
Cu
JPVYNHNXODAKFH-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CCN
Query on CCN

A ACETONITRILE
C2 H3 N
WEVYAHXRMPXWCK-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
B30 N/A in BindingDB
Kd: 28 nM  BindingMOAD
Kd: 28 nM  PDBbind
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
CMH
Query on CMH
A L-PEPTIDE LINKING C4 H9 Hg N O2 S CYS

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.15 Å
  • R-Value Free: 0.187
  • R-Value Work: 0.143
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 42.36 α = 90.00
b = 41.48 β = 104.34
c = 72.23 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-01-14
  • Released Date: 2006-04-04
  • Deposition author(s): Jude, K.M., Christianson, D.W.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4