Crystal structure of Aquifex aeolicus RNase III (D44N) complexed with product of double-stranded RNA processing
DOI:10.2210/pdb2ez6/pdb   NDB ID: PR0185
2EZ6
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase/rna
    Structure Weight: 70302.67
    Molecule: 28-MER
    Polymer: 1 Type: rna Length: 28
    Chains: C, D
    Molecule: Ribonuclease III
    Polymer: 2 Type: protein Length: 221
    Chains: A, B
    EC#: 3.1.26.3   
    Mutation: D44N
    Organism: Aquifex aeolicus
    Gene Names: rnc aq_946
    UniProtKB: Protein Feature View | Search PDB | O67082  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 2
    Scientific Name: Aquifex aeolicus   Taxonomy   Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    1JFZ   Crystal structure of a MN(II)-complex of RNase III endonuclease domain from Aquifex aeolicus 
    1O0W   The crystal structure of RNase III from Thermotoga maritima 
    1RC5   The crystal structure of MG(II)-complex of RNase III endonuclease domain from Aquifex aeolicus 
    1RC7   Crystal structure of RNase III mutant E110K from Aquifex aeolicus complexed with ds-RNA (5'-GGCGCGCGCC-3') 
    1YYK   Crystal structure of RNase III (E110K) from Aquifex aeolicus complexed with ds-RNA (5'-CGCGAAUUCGCG-3') at 2.9-Angstrom Resolution 
    1YYO   Crystal structure of RNase III from Aquifex aeolicus complexed with ds-RNA (5'-CGCGAAUUCGCG-3') at 2.5-Angstrom Resolution 
    1YYW   Crystal structure of RNase III from Aquifex aeolicus complexed with ds-RNA (5'-AAAUAUAUAUUU-3') at 2.8-Angstrom Resolution 
    1YZ9   Crystal structure of RNase III mutant E110Q from Aquifex aeolicus complexed with ds-RNA (5'-CGAACUUCGCG-3') at 2.1-Angstrom Resolution 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    MG
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    MG Mg
    MAGNESIUM ION
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:PR0185
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors
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