X-ray structure of human CDK6-Vcyclin in complex with the inhibitor PD0332991 DOI:10.2210/pdb2euf/pdb

2EUF   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A+S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Cell Cycle/transferase Structure Weight: 64356.99 Molecule: viral Cyclin Polymer: 1 Type: protein Length: 254 Chains: A Organism Herpesvirus saimiri (strain 11) Gene Names 72 ECLF2 UniProtKB:   Protein Feature View | Search PDB | Q01043     Molecule: Cell division protein kinase 6 Polymer: 2 Type: protein Length: 308 Chains: B EC#: 2.7.11.22    Fragment: fragment 1-308 Organism Homo sapiens Gene Names CDK6 CDKN6 UniProtKB:   Protein Feature View | Search PDB | Q00534         Source Hide Polymer: 1 Scientific Name: Herpesvirus saimiri (strain 11)   Taxonomy   Expression System: Spodoptera frugiperda   Polymer: 2 Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Spodoptera frugiperda       Ligand Chemical Component Hide Identifier Formula Name Interactions ACT Search  Download  C2 H3 O2 ACETATE ION   Ligand Explorer CA Search  Download  Ca CALCIUM ION   Ligand Explorer DMS Search  Download  C2 H6 O S DIMETHYL SULFOXIDE   Ligand Explorer LQQ Search  Download  C24 H29 N7 O2 6-ACETYL-8-CYCLOPENTYL-5-METHYL-2-[(5-PIPERAZIN- 1-YLPYRIDIN-2-YL)AMINO]PYRIDO[2,3-D]PYRIMIDIN- 7(8H)-ONE   Ligand Explorer     External Ligand Annotations Hide Identifier   Binding Affinity (Sequence Identity %) LQQ Search  Download  IC50: 16 nM (100) - data from BindingDB   N/A in BindingMoad IC50: 15 nM - data from PDBbind       External Domain Annotations Hide SCOP Classification v1.75: 3 Domains - data from SCOP   CATH Classification v3.4.0: 4 Domains - data from CATH   Pfam Classification: 4 Domains - data from Pfam   GO Terms: 55 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Schulze-Gahmen, U.,  Lu, H. Deposition:   2005-10-28 Release:   2006-07-04 Last Modified (REVDAT):   2011-07-13     Revision History    Hide Mouse over text for details 2011-07-13 Flag residual B-value 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   3.00 R-Value: 0.233 (obs.) R-Free: 0.306 Space Group: P 65 2 2 Unit Cell:   Length [Å] Angles [°] a = 71.15 α = 90.00  b = 71.15 β = 90.00  c = 446.88 γ = 120.00