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Structure of VIL (extra KI/I2 added)-xylanase
2D98
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase
    Structure Weight: 21861.60
    Molecule: Endo-1,4-beta-xylanase 2
    Polymer: 1 Type: protein Length: 189
    Chains: A
    EC#: 3.2.1.8   
    Organism Trichoderma reesei
    Gene Name xyn2
    UniProtKB:   Protein Feature View | Search PDB | P36217  
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Hypocrea jecorina   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    2D8O  VIL-thaumatin 
    2D8P  HYPER-VIL-thaumatin 
    2D8W  HYPER-VIL-trypsine 
    2D91  HYPER-VIL-lysozyme 
    2D97  VIL-xylanase 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    IOD
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    IOD I
    IODIDE ION
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    IYR
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    IYR C9 H10 I N O3 TYR lPeptideLinking
    TYI
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    TYI C9 H9 I2 N O3 TYR lPeptideLinking
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Miyatake, H.,  Hasegawa, T.,  Yamano, A.

    Deposition:   2005-12-09
    Release:   2006-07-11
    Last Modified (REVDAT):   2009-02-24
     
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.00
    R-Value: 0.209 (obs.)
    R-Free: 0.253
    Space Group: P 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 40.19 α = 90.00 
    b = 38.56 β = 110.18 
    c = 56.79 γ = 90.00