Crystal Structure Of Pyruvate-Ferredoxin Oxidoreductase From Desulfovibrio africanus DOI:10.2210/pdb2c42/pdb

2C42   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A+S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Oxidoreductase Structure Weight: 270675.29 Molecule: PYRUVATE-FERREDOXIN OXIDOREDUCTASE Polymer: 1 Type: protein Length: 1231 Chains: A, B Details: COMPLEXED WITH IRON/SULFUR CLUSTER, THIAMIN DIPHOSPHATE, SOAKING 16 MIN. WITH PYRUVIC ACID (PH 6.0 AND DTT) Organism Desulfovibrio africanus Gene Name por UniProtKB:   Protein Feature View | Search PDB | P94692         Source Hide Polymer: 1 Scientific Name: Desulfovibrio africanus   Taxonomy         Related PDB Entries Hide Identifier Details 1B0P  CRYSTAL STRUCTURE OF PYRUVATE-FERREDOXIN OXIDOREDUCTASE FROM DESULFOVIBRIO AFRICANUS  1KEK  CRYSTAL STRUCTURE OF THE FREE RADICAL INTERMEDIATE OFPYRUVATE:FERREDOXIN OXIDOREDUCTASE  2C3M  CRYSTAL STRUCTURE OF PYRUVATE-FERREDOXIN OXIDOREDUCTASE FROM DESULFOVIBRIO AFRICANUS  2C3O  CRYSTAL STRUCTURE OF THE FREE RADICAL INTERMEDIATE OF PYRUVATE:FERREDOXIN OXIDOREDUCTASE FROM DESULFOVIBRIO AFRICANUS  2C3P  CRYSTAL STRUCTURE OF THE FREE RADICAL INTERMEDIATE OF PYRUVATE:FERREDOXIN OXIDOREDUCTASE FROM DESULFOVIBRIO AFRICANUS  2C3U  CRYSTAL STRUCTURE OF PYRUVATE-FERREDOXIN OXIDOREDUCTASE FROM DESULFOVIBRIO AFRICANUS, OXYGEN INHIBITED FORM  2C3Y  CRYSTAL STRUCTURE OF THE RADICAL FORM OF PYRUVATE:FERREDOXIN OXIDOREDUCTASE FROM DESULFOVIBRIO AFRICANUS  2PDA  CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN PYRUVATE- FERREDOXIN OXIDOREDUCTASE FROM DESULFOVIBRIO AFRICANUS AND PYRUVATE.      Ligand Chemical Component Hide Identifier Formula Name Interactions CA Search  Download  Ca CALCIUM ION   Ligand Explorer MG Search  Download  Mg MAGNESIUM ION   Ligand Explorer PYR Search  Download  C3 H4 O3 PYRUVIC ACID   Ligand Explorer SF4 Search  Download  Fe4 S4 IRON/SULFUR CLUSTER   Ligand Explorer TPP Search  Download  C12 H19 N4 O7 P2 S THIAMINE DIPHOSPHATE   Ligand Explorer     External Domain Annotations Hide SCOP Classification v1.75: 10 Domains - data from SCOP   CATH Classification v3.4.0: 14 Domains - data from CATH   Pfam Classification: 8 Domains - data from Pfam   GO Terms: 6 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Cavazza, C.,  Contreras-Martel, C.,  Pieulle, L.,  Chabriere, E.,  Hatchikian, E.C.,  Fontecilla-Camps, J.C. Deposition:   2005-10-14 Release:   2006-12-20 Last Modified (REVDAT):   2013-03-06     Revision History    Hide Mouse over text for details 2013-03-06 Data collection 2013-03-06 Citation 2013-03-06 Other 2013-03-06 Version format compliance 2013-03-06 Refinement description 2013-03-06 Biological assembly 2013-03-06 Geometry validation     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   1.78 R-Value: 0.195 (obs.) R-Free: 0.219 Space Group: P 21 21 21 Unit Cell:   Length [Å] Angles [°] a = 86.30 α = 90.00  b = 145.98 β = 90.00  c = 211.61 γ = 90.00