FACTOR XA - CATION DOI:10.2210/pdb2bok/pdb

2BOK   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Biological Assembly (gz) (A+S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Hydrolase Structure Weight: 33655.56 Molecule: COAGULATION FACTOR X Polymer: 1 Type: protein Length: 241 Chains: A EC#: 3.4.21.6    Fragment: CATALYTIC DOMAIN, RESIDUES 234-475 Mutation: YES Organism Homo sapiens Gene Name F10 UniProtKB:   Protein Feature View | Search PDB | P00742     Molecule: COAGULATION FACTOR X Polymer: 2 Type: protein Length: 55 Chains: L EC#: 3.4.21.6    Fragment: EGF2 DOMAIN, RESIDUES 126-180 Organism Homo sapiens Gene Name F10 UniProtKB:   Protein Feature View | Search PDB | P00742       Source Hide Polymer: 1 Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli   Polymer: 2 Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli       Related PDB Entries Hide Identifier Details 1C5M  STRUCTURAL BASIS FOR SELECTIVITY OF A SMALL MOLECULE, S1-BINDING, SUB- MICROMOLAR INHIBITOR OF UROKINASE TYPE PLASMINOGEN ACTIVATOR  1EZQ  CRYSTAL STRUCTURE OF HUMAN COAGULATION FACTOR XA COMPLEXED WITH RPR128515  1F0R  CRYSTAL STRUCTURE OF HUMAN COAGULATION FACTOR XA COMPLEXED WITH RPR208815  1F0S  CRYSTAL STRUCTURE OF HUMAN COAGULATION FACTOR XA COMPLEXED WITH RPR208707  1FAX  COAGULATION FACTOR XA INHIBITOR COMPLEX  1FJS  CRYSTAL STRUCTURE OF THE INHIBITOR ZK-807834 (CI-1031)COMPLEXED WITH FACTOR XA  1FXY  COAGULATION FACTOR XA-TRYPSIN CHIMERA INHIBITED WITH D-PHE-PRO-ARG- CHLOROMETHYLKETONE  1G2L  FACTOR XA INHIBITOR COMPLEX  1G2M  FACTOR XA INHIBITOR COMPLEX  1HCG  BLOOD COAGULATION FACTOR XA  1IOE  HUNMAN COAGULATION FACTOR XA COMPLEXD WITH M55532  1IQE  HUMAN COAGULATION FACTOR XA COMPLEXD WITH M55590  1IQF  HUMAN COAGULATION FACTOR XA COMPLEXD WITH M55165  1IQG  HUNMAN COAGULATION FACTOR XA COMPLEXD WITH M55159  1IQH  HUNMAN COAGULATION FACTOR XA COMPLEXD WITH M55143  1IQI  HUNMAN COAGULATION FACTOR XA COMPLEXD WITH M55125  1IQJ  HUNMAN COAGULATION FACTOR XA COMPLEXD WITH M55124  1IQK  HUNMAN COAGULATION FACTOR XA COMPLEXD WITH M55113  1IQL  HUNMAN COAGULATION FACTOR XA COMPLEXD WITH M54476  1IQM  HUNMAN COAGULATION FACTOR XA COMPLEXD WITH M54471  1IQN  HUMAN COAGULATION FACTOR XA COMPLEXD WITH M55192  1KSN  CRYSTAL STRUCTURE OF HUMAN COAGULATION FACTOR XA COMPLEXEDWITH FXV673  1KYE  FACTOR XA IN COMPLEX WITH (R)-2-(3- ADAMANTAN-1-YL-UREIDO)-3-(3-CARBAMIMIDOYL- PHENYL)-N-PHENETHYL-PROPIONAMIDE  1LPG  CRYSTAL STRUCTURE OF FXA IN COMPLEX WITH 79.  1LPK  CRYSTAL STRUCTURE OF FXA IN COMPLEX WITH 125.  1LPZ  CRYSTAL STRUCTURE OF FXA IN COMPLEX WITH 41.  1LQD  CRYSTAL STRUCTURE OF FXA IN COMPLEX WITH 45.  1MQ5  CRYSTAL STRUCTURE OF 3-CHLORO-N-[4-CHLORO -2-[[(4-CHLOROPHENYL)AMINO]CARBONYL]PHENYL]- 4-[(4-METHYL-1-PIPERAZINYL)METHYL]-2- THIOPHENECARBOXAMIDE COMPLEXED WITHHUMAN FACTOR XA  1MQ6  CRYSTAL STRUCTURE OF 3-CHLORO-N-[4-CHLORO -2-[[(5-CHLORO-2-PYRIDINYL)AMINO]CARBONYL ]-6-METHOXYPHENYL]-4-[[(4,5-DIHYDRO-2- OXAZOLYL)METHYLAMINO]METHYL]-2- THIOPHENECARBOXAMIDE COMPLEXED WITH HUMAN FACTOR XA  1MSX  HUMAN FACTOR XA COMPLEXED WITH 2-[3-(15N- AMINO-15N-IMINO-13C-METHYL)PHENOXY]-6-[3 -(15N-AMINO-13C-METHYL)PHENOXY]-3,5- DIFLUORO-4-METHYLPYRIDINE (ZK-806299), BINDING MODELFROM DOUBLE REDOR NMR AND MD SIMULATIONS.  1NFU  CRYSTAL STRUCTURE OF HUMAN COAGULATION FACTOR XA COMPLEXEDWITH RPR132747  1NFW  CRYSTAL STRUCTURE OF HUMAN COAGULATION FACTOR XA COMPLEXEDWITH RPR209685  1NFX  CRYSTAL STRUCTURE OF HUMAN COAGULATION FACTOR XA COMPLEXEDWITH RPR208944  1NFY  CRYSTAL STRUCTURE OF HUMAN COAGULATION FACTOR XA COMPLEXEDWITH RPR200095  1NL8  THEORETICAL MODEL OF THE TISSUE FACTOR/ FACTOR VIIA/FACTORXA COMPLEX  1P0S  CRYSTAL STRUCTURE OF BLOOD COAGULATION FACTOR XA IN COMPLEXWITH ECOTIN M84R  1V3X  FACTOR XA IN COMPLEX WITH THE INHIBITOR 1 -[6-METHYL-4,5,6,7-TETRAHYDROTHIAZOLO(5, 4-C)PYRIDIN-2-YL] CARBONYL-2-CARBAMOYL-4 -(6-CHLORONAPHTH-2-YLSULPHONYL)PIPERAZINE  1XKA  FACTOR XA COMPLEXED WITH A SYNTHETIC INHIBITOR FX-2212A,(2S) -(3'-AMIDINO-3- BIPHENYLYL)-5-(4-PYRIDYLAMINO)PENTANOIC ACID  1XKB  FACTOR XA COMPLEXED WITH A SYNTHETIC INHIBITOR FX-2212A,(2S) -(3'-AMIDINO-3- BIPHENYLYL)-5-(4-PYRIDYLAMINO)PENTANOIC ACID  2BMG  CRYSTAL STRUCTURE OF FACTOR XA IN COMPLEX WITH 50  2BOH  CRYSTAL STRUCTURE OF FACTOR XA IN COMPLEX WITH 1      Ligand Chemical Component Hide Identifier Formula Name Interactions 784 Search  Download  C22 H32 N5 O2 [AMINO (4-{(3AS,4R,8AS,8BR)-1,3-DIOXO-2- [3- (TRIMETHYLAMMONIO) PROPYL]DECAHYDROPYRROLO[3,4- A] PYRROLIZIN-4-YL}PHENYL) METHYLENE]AMMONIUM   Ligand Explorer NA Search  Download  Na SODIUM ION   Ligand Explorer     External Ligand Annotations Hide Identifier   Binding Affinity (Sequence Identity %) 784 Search  Download  N/A in BindingDB Ki: 280 nM - data from BindingMOAD   Ki: 280 nM - data from PDBbind       External Domain Annotations Hide SCOP Classification v1.75: 2 Domains - data from SCOP   CATH Classification v3.4.0: 3 Domains - data from CATH   Pfam Classification: 1 Domain - data from Pfam       Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PQS (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Morgenthaler, M.,  Schaerer, K.,  Paulini, R.,  Obst-Sander, U.,  Banner, D.W.,  Schlatter, D.,  Benz, J.,  Stihle, M.,  Diederich, F. Deposition:   2005-04-12 Release:   2005-06-16 Last Modified (REVDAT):   2009-02-24     Revision History    Hide Mouse over text for details 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data: N/A Resolution[Å]:   1.64 R-Value: 0.206 (obs.) R-Free: 0.237 Space Group: P 21 21 21 Unit Cell:   Length [Å] Angles [°] a = 48.84 α = 90.00  b = 71.67 β = 90.00  c = 72.75 γ = 90.00      Molecule of the Month Hide Thrombin Trypsin Serpins Tissue Factor Fibrin