2BGC

PRFA-G145S, A CONSTITUTIVE ACTIVE MUTANT OF THE TRANSCRIPTIONAL REGULATOR IN L.MONOCYTOGENES

Structural Biology Knowledgebase: 2BGC SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.268
  • R-Value Work: 0.195

Literature

Macromolecules
Sequence Display for 2BGC

Classification: TRANSCRIPTION

Total Structure Weight: 219754.09

Macromolecule Entities
Molecule Chains Length Organism Details
PRFA A, B, D..., E, F, G, H, IA, B, D, E, F, G, H, I 238 Listeria monocytogenes Mutation: G145S
Gene Name(s): prfA lmo0200
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
DTT
Query on DTT

F 2,3-DIHYDROXY-1,4-DITHIOBUTANE
1,4-DITHIOTHREITOL (Synonym)
C4 H10 O2 S2
VHJLVAABSRFDPM-IMJSIDKUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
DTU
Query on DTU

A (2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL
C4 H10 O2 S2
VHJLVAABSRFDPM-ZXZARUISSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
PR3
Query on PR3
A, B, D, E, F, G, H, I L-PEPTIDE LINKING C6 H13 N O S2 CYS

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.268
  • R-Value Work: 0.195
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 117.25 α = 90.00
b = 100.24 β = 90.33
c = 189.56 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-12-20
  • Released Date: 2005-04-14
  • Deposition author(s): Eiting, M., Hagelueken, G., Schubert, W.-D., Heinz, D.W.

Revision History

  • 2011-07-13
    Type: Flag residual B-value | Details: Tagged residual B temperature factor
  • 2011-07-13
    Type: Version format compliance | Details: Compliance with PDBx exchange dictionary V4