2BBD

Crystal Structure of the STIV MCP

Structural Biology Knowledgebase: 2BBD SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.04 Å
  • R-Value Free: 0.246
  • R-Value Work: 0.207

Literature

Macromolecules
Sequence Display for 2BBD

Classification: Viral protein

Total Structure Weight: 156986.91

Macromolecule Entities
Molecule Chains Length Organism Details
coat protein A, B, C, D 350 Sulfolobus turreted icosahedral virus 1 Mutation: M87M, M116M, M128M, M177M
Gene Name(s): B345
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MPD
Query on MPD

A, B, C, D (4S)-2-METHYL-2,4-PENTANEDIOL
C6 H14 O2
SVTBMSDMJJWYQN-YFKPBYRVSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B, C, D L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.04 Å
  • R-Value Free: 0.246
  • R-Value Work: 0.207
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 241.60 α = 90.00
b = 82.89 β = 116.00
c = 114.80 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-10-17
  • Released Date: 2005-12-06
  • Deposition author(s): Khayat, R.

Revision History

  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4