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Human cyclin dependent kinase 2 (cdk2) complexed with indenopyraxole DIN-101312
2B55
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transferase
    Structure Weight: 34398.34
    Molecule: Cell division protein kinase 2
    Polymer: 1 Type: protein Length: 298
    Chains: A
    EC#: 2.7.11.22   
    Organism: Homo sapiens
    Gene Names: Gene View for CDK2 CDKN2
    UniProtKB: Protein Feature View | Search PDB | P24941  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Spodoptera frugiperda  
     
  •   Related PDB Entries Hide
    Identifier Details
    2B52   
    2B53   
    2B54   
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    D31
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    D31 C24 H31 N5 O2
    2-(4-(AMINOMETHYL)PIPERIDIN-1-YL)-N-(3_CYCLOHEXYL- 4-OXO-2,4-DIHYDROINDENO[1,2-C]PYRAZOL-5-YL)ACETAMIDE
    D31:2B55
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    D31
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    D31
    IC50: 96 nM (100) - data from BindingDB  
    IC50: 96 nM - data from BindingMOAD  
    N/Ain PDBbind
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Muckelbauer, J.

    Deposition:   2005-09-27
    Release:   2005-10-11
    Last Modified (REVDAT):   2009-02-24
     
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    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.85
    R-Value: 0.213 (work)
    R-Free: 0.256
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 71.98 α = 90.00 
    b = 72.20 β = 90.00 
    c = 53.52 γ = 90.00