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Human cyclin dependent kinase 2 (CDK2) complexed with DPH-042562
2B52
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transferase
    Structure Weight: 34414.32
    Molecule: Cell division protein kinase 2
    Polymer: 1 Type: protein Length: 298
    Chains: A
    EC#: 2.7.11.22   
    Organism: Homo sapiens
    Gene Names: Gene View for CDK2 CDKN2
    UniProtKB: Protein Feature View | Search PDB | P24941  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Spodoptera frugiperda  
     
  •   Related PDB Entries Hide
    Identifier Details
    2B53   
    2B54   
    2B55   
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    D42
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    D42 C21 H23 N7 O2 S
    1-(3-(2,4-DIMETHYLTHIAZOL-5-YL)-4-OXO-2,4- DIHYDROINDENO[1,2-C]PYRAZOL-5-YL)-3-(4-METHYLPIPERAZIN- 1-YL)UREA
    D42:2B52
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    D42
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    D42
    IC50: 8 nM (100) - data from BindingDB  
    IC50: 8 nM - data from BindingMOAD  
    N/Ain PDBbind
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Muckelbauer, J.

    Deposition:   2005-09-27
    Release:   2005-10-11
    Last Modified (REVDAT):   2009-02-24
     
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.88
    R-Value: 0.219 (work)
    R-Free: 0.275
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 72.03 α = 90.00 
    b = 72.01 β = 90.00 
    c = 53.50 γ = 90.00