Crystal Structure of Photosystem II from Thermosynechococcus elongatus DOI:10.2210/pdb2axt/pdb

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Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Electron Transport Structure Weight: 717578.46 Molecule: Photosystem Q(B) protein Polymer: 1 Type: protein Length: 344 Chains: A, a EC#: 1.10.3.9    Fragment: residues 1-344 Organism Thermosynechococcus elongatus Gene Names psbA1 psbA-1 tlr1843 UniProtKB:   Protein Feature View | Search PDB | P0A444     Molecule: CP47 protein Polymer: 2 Type: protein Length: 510 Chains: B, b Organism Thermosynechococcus elongatus BP-1 Gene Name psbB UniProtKB:   Protein Feature View | Search PDB | Q9F1M3     Molecule: photosystem II CP43 protein Polymer: 3 Type: protein Length: 473 Chains: C, c Organism Thermosynechococcus elongatus BP-1 Gene Name psbC UniProtKB:   Protein Feature View | Search PDB | Q8DIF8     Molecule: photosystem II reaction center D2 protein Polymer: 4 Type: protein Length: 352 Chains: D, d EC#: 1.10.3.9    Organism Thermosynechococcus elongatus BP-1 Gene Names psbD1 tlr0455 psbD2 tlr1630 UniProtKB:   Protein Feature View | Search PDB | Q8CM25     Molecule: Cytochrome b559 alpha subunit Polymer: 5 Type: protein Length: 84 Chains: E, e Organism Thermosynechococcus elongatus Gene Names psbE tsr1541 UniProtKB:   Protein Feature View | Search PDB | Q8DIP0     Molecule: Cytochrome b559 beta subunit Polymer: 6 Type: protein Length: 45 Chains: F, f Organism Thermosynechococcus elongatus Gene Names psbF tsr1542 UniProtKB:   Protein Feature View | Search PDB | Q8DIN9     Molecule: Photosystem II reaction center H protein Polymer: 7 Type: protein Length: 66 Chains: H, h Organism Thermosynechococcus elongatus Gene Names psbH tsl1386 UniProtKB:   Protein Feature View | Search PDB | Q8DJ43     Molecule: Photosystem II reaction center I protein Polymer: 8 Type: protein Length: 38 Chains: I, i Organism Thermosynechococcus elongatus Gene Names psbI tsr1074 UniProtKB:   Protein Feature View | Search PDB | Q8DJZ6     Molecule: Photosystem II reaction center J protein Polymer: 9 Type: protein Length: 40 Chains: J, j Organism Thermosynechococcus elongatus Gene Names psbJ tsr1544 UniProtKB:   Protein Feature View | Search PDB | P59087     Molecule: Photosystem II reaction center protein K Polymer: 10 Type: protein Length: 37 Chains: K, k Organism Thermosynechococcus elongatus Gene Names psbK tsl0176 UniProtKB:   Protein Feature View | Search PDB | Q9F1K9     Molecule: Photosystem II reaction center L protein Polymer: 11 Type: protein Length: 37 Chains: L, l Organism Thermosynechococcus elongatus Gene Names psbL tsr1543 UniProtKB:   Protein Feature View | Search PDB | Q8DIN8     Molecule: Photosystem II reaction center M protein Polymer: 12 Type: protein Length: 36 Chains: M, m Organism Thermosynechococcus elongatus Gene Names psbM tsl2052 UniProtKB:   Protein Feature View | Search PDB | Q8DHA7     Molecule: Photosystem II manganese-stabilizing polypeptide Polymer: 13 Type: protein Length: 247 Chains: O, o Organism Thermosynechococcus elongatus Gene Names psbO tll0444 UniProtKB:   Protein Feature View | Search PDB | P0A431     Molecule: Photosystem II reaction center T protein Polymer: 14 Type: protein Length: 32 Chains: T, t Organism Thermosynechococcus elongatus Gene Names psbT tsr1531 UniProtKB:   Protein Feature View | Search PDB | Q8DIQ0     Molecule: Photosystem II 12 kDa extrinsic protein Polymer: 15 Type: protein Length: 104 Chains: U, u Organism Thermosynechococcus elongatus Gene Names psbU tll2409 UniProtKB:   Protein Feature View | Search PDB | Q9F1L5     Molecule: Cytochrome c-550 Polymer: 16 Type: protein Length: 137 Chains: V, v Organism Thermosynechococcus elongatus Gene Names psbV tll1285 UniProtKB:   Protein Feature View | Search PDB | P0A386     Molecule: Unassigned subunits Polymer: 17 Type: protein Length: 129 Chains: X, x Organism Thermosynechococcus elongatus Molecule: Photosystem II reaction center Z protein Polymer: 18 Type: protein Length: 62 Chains: Z, z Organism Thermosynechococcus elongatus Gene Names psbZ tsr1967 UniProtKB:   Protein Feature View | Search PDB | Q8DHJ2         Source Hide Polymer: 1 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 2 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 3 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 4 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 5 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 6 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 7 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 8 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 9 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 10 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 11 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 12 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 13 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 14 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 15 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 16 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 17 Scientific Name: Thermosynechococcus elongatus   Taxonomy     Polymer: 18 Scientific Name: Thermosynechococcus elongatus   Taxonomy         Ligand Chemical Component Hide Identifier Formula Name Interactions BCR Search  Download  C40 H56 BETA-CAROTENE   Ligand Explorer BCT Search  Download  C H O3 BICARBONATE ION   Ligand Explorer CA Search  Download  Ca CALCIUM ION   Ligand Explorer CLA Search  Download  C55 H72 Mg N4 O5 CHLOROPHYLL A   Ligand Explorer DGD Search  Download  C51 H96 O15 DIGALACTOSYL DIACYL GLYCEROL (DGDG)   Ligand Explorer FE2 Search  Download  Fe FE (II) ION   Ligand Explorer HEM Search  Download  C34 H32 Fe N4 O4 PROTOPORPHYRIN IX CONTAINING FE   Ligand Explorer LHG Search  Download  C38 H75 O10 P 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE   Ligand Explorer LMT Search  Download  C24 H46 O11 DODECYL-BETA-D-MALTOSIDE   Ligand Explorer MGE Search  Download  C38 H72 O10 (1S)-2-(ALPHA-L-ALLOPYRANOSYLOXY)-1-[(TRIDECANOYLOXY)METHYL]ETHYL PALMITATE   Ligand Explorer OEC Search  Download  Ca Mn4 O4 OXYGEN EVOLVING SYSTEM   Ligand Explorer PHO Search  Download  C55 H74 N4 O5 PHEOPHYTIN A   Ligand Explorer PQ9 Search  Download  C43 H64 O2 5-[(2E,6E,10E,14E,18E,22E)-3,7,11,15,19,23,27- HEPTAMETHYLOCTACOSA-2,6,10,14,18,22,26-HEPTAENYL]- 2,3-DIMETHYLBENZO-1,4-QUINONE   Ligand Explorer SQD Search  Download  C41 H78 O12 S 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA- D-GLUCOPYRANOSYL]-SN-GLYCEROL   Ligand Explorer UNK Search  Download  C4 H9 N O2 UNKNOWN   Ligand Explorer     Modified Residues Hide Identifier Formula Parent Type UNK Search  C4 H9 N O2 lPeptideLinking     External Domain Annotations Hide SCOP Classification v1.75: 17 Domains - data from SCOP   CATH Classification v3.4.0: 8 Domains - data from CATH   Pfam Classification: 19 Domains - data from Pfam   GO Terms: 167 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). 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Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Loll, B.,  Kern, J.,  Saenger, W.,  Zouni, A.,  Biesiadka, J. Deposition:   2005-09-06 Release:   2005-12-27 Last Modified (REVDAT):   2011-07-13     Revision History    Hide Mouse over text for details 2011-07-13 Version format compliance 2011-07-13 Source and taxonomy     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   3.00 R-Value: 0.234 (obs.) R-Free: 0.286 Space Group: P 21 21 21 Unit Cell:   Length [Å] Angles [°] a = 127.69 α = 90.00  b = 225.40 β = 90.00  c = 306.11 γ = 90.00      Molecule of the Month Hide Photosystem II