2AUS

Crystal structure of the archaeal box H/ACA sRNP Nop10-Cbf5 complex

Structural Biology Knowledgebase: 2AUS SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.224

Literature

Macromolecules
Sequence Display for 2AUS

Classification: ISOMERASE / STRUCTURAL PROTEIN

Total Structure Weight: 90561.98

Macromolecule Entities
Molecule Chains Length Organism Details
pseudouridine synthase A, C 334 Pyrococcus abyssi EC#: 5.4.99 IUBMB
Gene Name(s): truB PYRAB05220 PAB0356
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Ribosome biogenesis protein Nop10 B, D 60 Pyrococcus abyssi Gene Name(s): nop10 PYRAB08470 PAB7213
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PO4
Query on PO4

A, B, C, D PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

B, D ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.224
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 136.43 α = 90.00
b = 136.82 β = 90.00
c = 59.34 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-08-29
  • Released Date: 2006-07-11
  • Deposition author(s): Charron, C., Manival, X., Charpentier, B., Fourmann, J.-B., Godard, F., Branlant, C.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values