(3+1) assembly of three human telomeric DNA repeats into an asymmetrical dimeric G-quadruplex
DOI:10.2210/pdb2aqy/pdb   NDB ID: 2AQY
2AQY
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: DNA
    Structure Weight: 6900.54
    Molecule: 5'-D(*GP*(OIP)P*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*T)-3'
    Polymer: 1 Type: dna Length: 16
    Chains: A
    Fragment: three repeats of human telomeric DNA
    Mutation: G2(OIP)
    Details: G2(OIP) mutation
    Molecule: 5'-D(*TP*AP*GP*GP*GP*(DU))-3'
    Polymer: 2 Type: dna Length: 6
    Chains: B
    Fragment: single repeats of human telomeric DNA
    Mutation: T22(DU)
    Details: T22(DU) mutation
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
     
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  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:2AQY
     
 
Data in orange boxes are gathered from external resources (when available).
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  •   Deposition Summary Hide
    Authors:   Zhang, N.,  Phan, A.T.,  Patel, D.J.

    Deposition:   2005-08-18
    Release:   2006-03-07
    Last Modified (REVDAT):   2009-02-24
     
  •   Revision History    Hide
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    2011-07-13
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  •   Experimental Details Hide
    Method:   SOLUTION NMR
    Exp. Data:
      NMR Restraints
    NMR Restraint Grid  
    NMR Ensemble
    Conformers Calculated:     10
    Conformers Submitted:     10
    Selection Criteria: all calculated structures submitted,back calculated data agree with experimental NOESY spectrum,structures with acceptable covalent geometry,structures with favorable non-bond energy,structures with the least restraint violations,structures with the lowest energy,target function
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    Method: SOLUTION NMR