RCSB Protein Data Bank - RCSB PDB - 1Z50 Structure Summary

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Parainfluenza Virus 5 (SV5) Hemagglutinin-Neuraminidase (HN) with ligand DANA (soaked with sialic acid, pH 8.0)

DOI:10.2210/pdb1z50/pdb

1Z50

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Primary Citation

Related Citations in PDB Entry (REMARK 1) Hide

Molecular Description

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Source

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Polymer: 1

Scientific Name:

Simian virus 5

Taxonomy

Expression System:

Trichoplusia ni

Polymer: 3

Scientific Name:

Synthetic construct

Taxonomy

Related PDB Entries

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Identifier	Details
1Z4V
1Z4W
1Z4X
1Z4Y
1Z4Z

Ligand Chemical Component

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Identifier	Formula	Name	Interactions
CA Search Download	Ca	CALCIUM ION		Ligand Explorer
DAN Search Download	C₁₁ H₁₇ N O₈	2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID		Ligand Explorer
NAG Search Download	C₈ H₁₅ N O₆	N-ACETYL-D-GLUCOSAMINE		Ligand Explorer
NDG Search Download	C₈ H₁₅ N O₆	2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE		Ligand Explorer

External Domain Annotations Hide
Pfam Classification: 1 Domain - data from Pfam

GO Terms: 15 Terms - data from GO
Structural Biology Knowledgebase Data Hide

Data in orange boxes are gathered from external resources (when available).

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Biological Assembly 1

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Biological assembly 1 assigned by authors

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Deposition Summary

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Authors: Yuan, P., Thompson, T.B., Wurzburg, B.A., Paterson, R.G., Lamb, R.A., Jardetzky, T.S.

Deposition:	2005-03-16
Release:	2005-05-24
Last Modified (REVDAT):	2011-07-13

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2011-07-13
Version format compliance

2011-07-13
Biological assembly

Experimental Details

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Method: X-RAY DIFFRACTION
Exp. Data:
Structure Factors
EDS

Unit Cell:
	Length [Å]	Angles [°]
	a = 137.66	α = 90.00
	b = 137.66	β = 90.00
	c = 184.92	γ = 120.00