1YYE

Crystal structure of estrogen receptor beta complexed with way-202196


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.03 Å
  • R-Value Free: 0.269
  • R-Value Work: 0.223

Literature

Macromolecules
Sequence Display for 1YYE

Classification: TRANSCRIPTION

Total Structure Weight: 63376.25

Macromolecule Entities
Molecule Chains Length Organism Details
Estrogen receptor beta A, B 268 Homo sapiens Fragment: Ligand Binding Domain
Gene Name(s): ESR2 Gene View ESTRB NR3A2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
STEROID RECEPTOR COACTIVATOR-1 C, D 13 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
196
Query on 196

A, B 3-(3-FLUORO-4-HYDROXYPHENYL)-7-HYDROXY-1- NAPHTHONITRILE
C17 H10 F N O2
NSSOSHDCWCMNDM-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
196 IC50: 2.7 nM (100) BindingDB

IC50: 2.9 nM  BindingMOAD
IC50: 2.7 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.03 Å
  • R-Value Free: 0.269
  • R-Value Work: 0.223
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 52.08 α = 90.00
b = 88.50 β = 90.00
c = 100.14 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-02-24
  • Released Date: 2006-02-28
  • Deposition author(s): Mewshaw, R.E., Edsall Jr., R.J., Yang, C., Manas, E.S., Xu, Z.B., Henderson, R.A., Keith Jr., J.C., Harris, H.A.

Revision History

  • Version 1_0: 2006-02-28

    Type: Initial release

  • Version 1_1: 2008-04-30

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance