1Y9R

Crystal structure of the human mineralocorticoid receptor ligand-binding domain bound to deoxycorticosterone and harboring the S810L mutation responsible for a severe form of hypertension


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.96 Å
  • R-Value Free: 0.267
  • R-Value Work: 0.229

Literature

Macromolecules
Sequence Display for 1Y9R

Classification: TRANSCRIPTION LIGAND BINDING PROTEIN

Total Structure Weight: 59949.64

Macromolecule Entities
Molecule Chains Length Organism Details
Mineralocorticoid receptor A, B 255 Homo sapiens Fragment: LIGAND-BINDING DOMAIN
Mutation: S810L, C910A
Gene Name(s): NR3C2 Gene View MCR MLR
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
1CA
Query on 1CA

A, B DESOXYCORTICOSTERONE
4-PREGNEN-21-OL-3,20-DIONE; DOC; 21-HYDROXYPROGESTERONE (Synonym)
C21 H30 O3
ZESRJSPZRDMNHY-YFWFAHHUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.96 Å
  • R-Value Free: 0.267
  • R-Value Work: 0.229
  • Space Group: P 31

Unit Cell:

Length (Å) Angle (°)
a = 120.28 α = 90.00
b = 120.28 β = 90.00
c = 41.33 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-12-16
  • Released Date: 2005-05-24
  • Deposition author(s): Fagart, J., Huyet, J., Pinon, G.M., Rochel, M., Mayer, C., Rafestin-Oblin, M.E.

Revision History

  • Version 1_0: 2005-05-24

    Type: Initial release

  • Version 1_1: 2008-04-30

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance