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Crystal structure of Aclacinomycin-10-hydroxylase (RdmB) in complex with S-adenosyl-L-methionine (SAM) and 11-deoxy-beta-rhodomycin (DbrA)
1XDS
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transferase
    Structure Weight: 82669.76
    Molecule: Protein RdmB
    Polymer: 1 Type: protein Length: 374
    Chains: A, B
    EC#: 4.1.1   
    Organism: Streptomyces purpurascens
    Gene Name: rdmB
    UniProtKB: Protein Feature View | Search PDB | Q54527  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Streptomyces purpurascens   Taxonomy   Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    1QZZ  Crystal structure of aclacinomycin-10-hydroxylase (RdmB) in complex with S-adenosyl-L-methionine (SAM) 
    1R00  Crystal structure of aclacinomycin-10-hydroxylase (RdmB) in complex with S-adenosyl-L-homocystein (SAH) 
    1TW3  Crystal structure of carminomycin-4-O-methyltransferase (DnrK) in complex with S-adenosyl-L-homocystein (SAH) and epsilon-rhodomycin T (ET) 
    1XDU   
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    DRA
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    DRA C40 H51 N O14
    11-DEOXY-BETA-RHODOMYCIN
    DRA:1XDS
    SAM
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    SAM C15 H22 N6 O5 S
    S-ADENOSYLMETHIONINE
    SAM:1XDS
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    MSE
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    MSE C5 H11 N O2 Se MET lPeptideLinking
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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