IDENTIFICATION OF NOVEL P38 ALPHA MAP KINASE INHIBITORS USING FRAGMENT-BASED LEAD GENERATION.
1WBT
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transferase
    Structure Weight: 41788.11
    Molecule: MITOGEN-ACTIVATED PROTEIN KINASE 14
    Polymer: 1 Type: protein Length: 360
    Chains: A
    EC#: 2.7.11.24   
    Organism: Homo sapiens
    Gene Names: CSBP CSBP1 CSBP2 CSPB1 MXI2 SAPK2A Gene View for MAPK14
    UniProtKB: Search PDB | Q16539   Protein Feature View
     
  •   Structure Validation Hide

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  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    1A9U   THE COMPLEX STRUCTURE OF THE MAP KINASE P38/SB203580 
    1BL6   THE COMPLEX STRUCTURE OF THE MAP KINASE P38/SB216995 
    1BL7   THE COMPLEX STRUCTURE OF THE MAP KINASE P38/SB220025 
    1BMK   THE COMPLEX STRUCTURE OF THE MAP KINASE P38/SB218655 
    1DI9   THE STRUCTURE OF P38 MITOGEN-ACTIVATED PROTEIN KINASE INCOMPLEX WITH 4-[3- METHYLSULFANYLANILINO]-6,7-DIMETHOXYQUINAZOLINE 
    1IAN   HUMAN P38 MAP KINASE INHIBITOR COMPLEX 
    1KV1   P38 MAP KINASE IN COMPLEX WITH INHIBITOR 1 
    1KV2   HUMAN P38 MAP KINASE IN COMPLEX WITH BIRB 796 
    1M7Q   CRYSTAL STRUCTURE OF P38 MAP KINASE IN COMPLEX WITH ADIHYDROQUINAZOLINONE INHIBITOR 
    1OUK   THE STRUCTURE OF P38 ALPHA IN COMPLEX WITH APYRIDINYLIMIDAZOLE INHIBITOR 
    1OUY   THE STRUCTURE OF P38 ALPHA IN COMPLEX WITH A DIHYDROPYRIDO-PYRIMIDINE INHIBITOR 
    1OVE   THE STRUCTURE OF P38 ALPHA IN COMPLEX WITH ADIHYDROQUINOLINONE 
    1OZ1   P38 MITOGEN-ACTIVATED KINASE IN COMPLEX WITH 4-AZAINDOLEINHIBITOR 
    1R39   THE STRUCTURE OF P38ALPHA 
    1R3C   THE STRUCTURE OF P38ALPHA C162S MUTANT 
    1W7H   P38 KINASE CRYSTAL STRUCTURE IN COMPLEX WITH SMALL MOLECULE INHIBITOR 
    1W82   P38 KINASE CRYSTAL STRUCTURE IN COMPLEX WITH SMALL MOLECULE INHIBITOR 
    1W83   P38 KINASE CRYSTAL STRUCTURE IN COMPLEX WITH SMALL MOLECULE INHIBITOR 
    1W84   P38 KINASE CRYSTAL STRUCTURE IN COMPLEX WITH SMALL MOLECULE INHIBITOR 
    1WBN   FRAGMENT BASED P38 INHIBITORS 
    1WBO   FRAGMENT BASED P38 INHIBITORS 
    1WBS   IDENTIFICATION OF NOVEL P38 ALPHA MAP KINASE INHIBITORS USING FRAGMENT-BASED LEAD GENERATION. 
    1WBV   IDENTIFICATION OF NOVEL P38 ALPHA MAP KINASE INHIBITORS USING FRAGMENT-BASED LEAD GENERATION. 
    1WBW   IDENTIFICATION OF NOVEL P38 ALPHA MAP KINASE INHIBITORS USING FRAGMENT-BASED LEAD GENERATION. 
    1WFC   STRUCTURE OF APO, UNPHOSPHORYLATED, P38 MITOGEN ACTIVATEDPROTEIN KINASE P38 (P38 MAP KINASE) THE MAMMALIAN HOMOLOGUEOF THE YEAST HOG1 PROTEIN 
    1YQJ   CRYSTAL STRUCTURE OF P38 ALPHA IN COMPLEX WITH A SELECTIVEPYRIDAZINE INHIBITOR 
    1ZZ2   TWO CLASSES OF P38ALPHA MAP KINASE INHIBITORS HAVING ACOMMON DIPHENYLETHER CORE BUT EXHIBITING DIVERGENT BINDINGMODES 
    1ZZL   CRYSTAL STRUCTURE OF P38 WITH TRIAZOLOPYRIDINE 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    WBT
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    WBT C26 H25 F N4 O2
    3-FLUORO-5-MORPHOLIN-4-YL-N-[1-(2-PYRIDIN- 4-YLETHYL)-1H-INDOL-6-YL]BENZAMIDE
    WBT:1WBT
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    WBT
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    WBT
    IC50: 340 nM (100) - data from BindingDB  
    IC50: 340 nM - data from BindingMOAD  
    IC50: 340 nM - data from PDBbind  
     
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Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PQS (software)
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  •   Deposition Summary Hide
    Authors:   Tickle, J.,  Cleasby, A.,  Devine, L.A.,  Jhoti, H.

    Deposition:   2004-11-05
    Release:   2005-11-03
    Last Modified (REVDAT):   2009-02-24
     
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
    N/A
    Resolution[Å]:   2.00
    R-Value: 0.229 (obs.)
    R-Free: 0.276
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 45.52 α = 90.00 
    b = 85.60 β = 90.00 
    c = 126.58 γ = 90.00