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IDENTIFICATION OF NOVEL P38 ALPHA MAP KINASE INHIBITORS USING FRAGMENT-BASED LEAD GENERATION.
1WBT
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transferase
    Structure Weight: 41788.11
    Molecule: MITOGEN-ACTIVATED PROTEIN KINASE 14
    Polymer: 1 Type: protein Length: 360
    Chains: A
    EC#: 2.7.11.24   
    Organism Homo sapiens
    Gene Names MAPK14 CSBP CSBP1 CSBP2 CSPB1 MXI2 SAPK2A
    UniProtKB:   Protein Feature View | Search PDB | Q16539  
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
     
  •   Related PDB Entries Hide
    Identifier Details
    1A9U  THE COMPLEX STRUCTURE OF THE MAP KINASE P38/SB203580 
    1BL6  THE COMPLEX STRUCTURE OF THE MAP KINASE P38/SB216995 
    1BL7  THE COMPLEX STRUCTURE OF THE MAP KINASE P38/SB220025 
    1BMK  THE COMPLEX STRUCTURE OF THE MAP KINASE P38/SB218655 
    1DI9  THE STRUCTURE OF P38 MITOGEN-ACTIVATED PROTEIN KINASE INCOMPLEX WITH 4-[3- METHYLSULFANYLANILINO]-6,7-DIMETHOXYQUINAZOLINE 
    1IAN  HUMAN P38 MAP KINASE INHIBITOR COMPLEX 
    1KV1  P38 MAP KINASE IN COMPLEX WITH INHIBITOR 1 
    1KV2  HUMAN P38 MAP KINASE IN COMPLEX WITH BIRB 796 
    1M7Q  CRYSTAL STRUCTURE OF P38 MAP KINASE IN COMPLEX WITH ADIHYDROQUINAZOLINONE INHIBITOR 
    1OUK  THE STRUCTURE OF P38 ALPHA IN COMPLEX WITH APYRIDINYLIMIDAZOLE INHIBITOR 
    1OUY  THE STRUCTURE OF P38 ALPHA IN COMPLEX WITH A DIHYDROPYRIDO-PYRIMIDINE INHIBITOR 
    1OVE  THE STRUCTURE OF P38 ALPHA IN COMPLEX WITH ADIHYDROQUINOLINONE 
    1OZ1  P38 MITOGEN-ACTIVATED KINASE IN COMPLEX WITH 4-AZAINDOLEINHIBITOR 
    1R39  THE STRUCTURE OF P38ALPHA 
    1R3C  THE STRUCTURE OF P38ALPHA C162S MUTANT 
    1W7H  P38 KINASE CRYSTAL STRUCTURE IN COMPLEX WITH SMALL MOLECULE INHIBITOR 
    1W82  P38 KINASE CRYSTAL STRUCTURE IN COMPLEX WITH SMALL MOLECULE INHIBITOR 
    1W83  P38 KINASE CRYSTAL STRUCTURE IN COMPLEX WITH SMALL MOLECULE INHIBITOR 
    1W84  P38 KINASE CRYSTAL STRUCTURE IN COMPLEX WITH SMALL MOLECULE INHIBITOR 
    1WBN  FRAGMENT BASED P38 INHIBITORS 
    1WBO  FRAGMENT BASED P38 INHIBITORS 
    1WBS  IDENTIFICATION OF NOVEL P38 ALPHA MAP KINASE INHIBITORS USING FRAGMENT-BASED LEAD GENERATION. 
    1WBV  IDENTIFICATION OF NOVEL P38 ALPHA MAP KINASE INHIBITORS USING FRAGMENT-BASED LEAD GENERATION. 
    1WBW  IDENTIFICATION OF NOVEL P38 ALPHA MAP KINASE INHIBITORS USING FRAGMENT-BASED LEAD GENERATION. 
    1WFC  STRUCTURE OF APO, UNPHOSPHORYLATED, P38 MITOGEN ACTIVATEDPROTEIN KINASE P38 (P38 MAP KINASE) THE MAMMALIAN HOMOLOGUEOF THE YEAST HOG1 PROTEIN 
    1YQJ  CRYSTAL STRUCTURE OF P38 ALPHA IN COMPLEX WITH A SELECTIVEPYRIDAZINE INHIBITOR 
    1ZZ2  TWO CLASSES OF P38ALPHA MAP KINASE INHIBITORS HAVING ACOMMON DIPHENYLETHER CORE BUT EXHIBITING DIVERGENT BINDINGMODES 
    1ZZL  CRYSTAL STRUCTURE OF P38 WITH TRIAZOLOPYRIDINE 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    WBT
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    WBT C26 H25 F N4 O2
    3-FLUORO-5-MORPHOLIN-4-YL-N-[1-(2-PYRIDIN- 4-YLETHYL)-1H-INDOL-6-YL]BENZAMIDE
    WBT:1WBT
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    WBT
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    WBT
    IC50: 340 nM (100) - data from BindingDB  
    IC50: 340 nM - data from BindingMOAD  
    IC50: 340 nM - data from PDBbind  
     
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  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PQS (software)
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  •   Deposition Summary Hide
    Authors:   Tickle, J.,  Cleasby, A.,  Devine, L.A.,  Jhoti, H.

    Deposition:   2004-11-05
    Release:   2005-11-03
    Last Modified (REVDAT):   2009-02-24
     
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
    N/A
    Resolution[Å]:   2.00
    R-Value: 0.229 (obs.)
    R-Free: 0.276
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 45.52 α = 90.00 
    b = 85.60 β = 90.00 
    c = 126.58 γ = 90.00