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Influenza B virus neuraminidase complexed with 1-(4-Carboxy-2-(3-pentylamino)phenyl)-5-aminomethyl-5-hydroxymethyl-pyrrolidin-2-one
1VCJ
ENTRY 1VCJ SUPERSEDES 1UJA
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase
    Structure Weight: 43681.03
    Molecule: NEURAMINIDASE
    Polymer: 1 Type: protein Length: 389
    Chains: A
    EC#: 3.2.1.18   
    Fragment: CATALYTIC DOMAIN RESIDUES 78-466
    Organism: Influenza B virus (B/Lee/40)
    Gene Name: NA
    UniProtKB: Protein Feature View | Search PDB | P03474  
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    IBA
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    IBA C18 H27 N3 O4
    4-[(2R)-2-(AMINOMETHYL)-2-(HYDROXYMETHYL)- 5-OXOPYRROLIDIN-1-YL]-3-[(1-ETHYLPROPYL)AMINO]BENZOIC ACID
    IBA:1VCJ
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    IBA
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    IBA
    N/Ain BindingDB
    IC50: 26000 nM - data from BindingMOAD  
    N/Ain PDBbind
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA,PQS (software)
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  •   Deposition Summary Hide
    Authors:   Lommer, B.S.,  Ali, S.M.,  Bajpai, S.N.,  Brouillette, W.J.,  Air, G.M.,  Luo, M.

    Deposition:   2004-03-09
    Release:   2004-03-23
    Last Modified (REVDAT):   2011-10-05

    Previous versions:  1UJA
     
  •   Revision History    Hide
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    2011-10-05
    Linkage
    2011-07-13
    Version format compliance
    2011-07-13
    Biological assembly
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.40
    R-Value: 0.214 (obs.)
    R-Free: 0.255
    Space Group: P 4 21 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 124.36 α = 90.00 
    b = 124.36 β = 90.00 
    c = 71.47 γ = 90.00