1UW9

L290F-A222T CHLAMYDOMONAS RUBISCO MUTANT

Structural Biology Knowledgebase: 1UW9 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.05 Å
  • R-Value Free: 0.194
  • R-Value Work: 0.157

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1UW9

Classification: LYASE

Total Structure Weight: 558907.50

Macromolecule Entities
Molecule Chains Length Organism Details
RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN A, B, E..., H, K, O, R, VA, B, E, H, K, O, R, V 475 Chlamydomonas reinhardtii EC#: 4.1.1.39 IUBMB
Mutation: L46P, A222T, L290F
Gene Name(s): rbcL
RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1 C, F, I..., J, M, P, T, WC, F, I, J, M, P, T, W 140 Chlamydomonas reinhardtii EC#: 4.1.1.39 IUBMB
Mutation: T128S, F132W
Gene Name(s): RBCS-1

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CAP
Query on CAP

A, B, E, O, R, V 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE
C6 H14 O13 P2
ITHCSGCUQDMYAI-ZMIZWQJLSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

A, B, C, E, H, I, J, K, M, O, P, R, T, V, W 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B, E, H, K, O, R, V MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 3 Unique
ID Chains Type Formula 2D Diagram Parent
HYP
Query on HYP
A, B, E, H, K, O, R, V L-PEPTIDE LINKING C5 H9 N O3 PRO
KCX
Query on KCX
A, B, E, H, K, O, R, V L-PEPTIDE LINKING C7 H14 N2 O4 LYS
SMC
Query on SMC
A, B, E, H, K, O, R, V L-PEPTIDE LINKING C4 H9 N O2 S CYS

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.05 Å
  • R-Value Free: 0.194
  • R-Value Work: 0.157
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 126.07 α = 90.00
b = 178.20 β = 120.35
c = 120.46 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-02-03
  • Released Date: 2005-01-12
  • Deposition author(s): Karkehabadi, S., Taylor, T.C., Spreitzer, R.J., Andersson, I.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4