Structure of the K38A mutant of EcoRV bound to cognate DNA and Mn2+ DOI:10.2210/pdb1stx/pdb   NDB ID: PD0529

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Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Hydrolase/dna Structure Weight: 63954.83 Molecule: 5'-D(*AP*AP*AP*GP*AP*T)-3' Polymer: 1 Type: dna Length: 6 Chains: C, E Molecule: 5'-D(P*AP*TP*CP*TP*T)-3' Polymer: 2 Type: dna Length: 5 Chains: D, F Molecule: Type II restriction enzyme EcoRV Polymer: 3 Type: protein Length: 244 Chains: A, B EC#: 3.1.21.4    Mutation: K38A Details: COMPLEXED WITH CLEAVED DNA DUPLEX Organism Escherichia coli Gene Name ecoRVR UniProtKB:   Protein Feature View | Search PDB | P04390         Source Hide Polymer: 1 Scientific Name: Synthetic construct   Taxonomy     Polymer: 2 Scientific Name: Synthetic construct   Taxonomy     Polymer: 3 Scientific Name: Escherichia coli   Taxonomy   Expression System: Escherichia coli       Ligand Chemical Component Hide Identifier Formula Name Interactions MN Search  Download  Mn MANGANESE (II) ION   Ligand Explorer     External Domain Annotations Hide SCOP Classification v1.75: 2 Domains - data from SCOP   CATH Classification v3.4.0: 2 Domains - data from CATH   Pfam Classification: 1 Domain - data from Pfam   GO Terms: 8 Terms - data from GO      Structural Biology Knowledgebase Data Hide   Nucleic Acid Database Hide View the NDB ID associated with this structure: PD0529     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Horton, N.C.,  Perona, J.J. Deposition:   2004-03-25 Release:   2004-04-06 Last Modified (REVDAT):   2009-02-24     Revision History    Hide Mouse over text for details 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data: N/A Resolution[Å]:   2.10 R-Value: 0.201 (obs.) R-Free: 0.262 Space Group: P 21 Unit Cell:   Length [Å] Angles [°] a = 63.71 α = 90.00  b = 58.69 β = 107.70  c = 82.10 γ = 90.00      Molecule of the Month Hide Restriction Enzymes