CRYSTAL STRUCTURE OF THE OXYTRICHA NOVA TELOMERE END-BINDING PROTEIN COMPLEXED WITH NONCOGNATE SSDNA GGGGTTTTGGCG DOI:10.2210/pdb1ph4/pdb   NDB ID: PD0438

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Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: DNA Binding Protein/dna Structure Weight: 89060.86 Molecule: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*GP*T)-3' Polymer: 1 Type: dna Length: 13 Chains: G, H Details: CHAINS G AND H ARE A G-QUARTET LINKED DNA DIMER. 3' TERMINAL SINGLE STRAND DNA SEQUENCE OF MACRONUCLEAR TELOMERES. Molecule: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*CP*G)-3' Polymer: 2 Type: dna Length: 12 Chains: D Mutation: G11C Details: CHAIN D IS SINGLE STRAND DNA. 3' TERMINAL SINGLE STRAND DNA SEQUENCE OF MACRONUCLEAR TELOMERES, G TO C SUBSTITUTION. Molecule: Telomere-binding protein alpha subunit Polymer: 3 Type: protein Length: 460 Chains: A Details: ALANINE VERSION Organism Sterkiella nova Gene Names MAC-56A MAC-56K MAC-56S UniProtKB:   Protein Feature View | Search PDB | P29549     Molecule: Telomere-binding protein beta subunit Polymer: 4 Type: protein Length: 216 Chains: B Fragment: residues 9-224 Organism Sterkiella nova Gene Names MAC-41A MAC-41S UniProtKB:   Protein Feature View | Search PDB | P16458         Source Hide Polymer: 1 Scientific Name: Synthetic construct   Taxonomy     Polymer: 2 Scientific Name: Synthetic construct   Taxonomy     Polymer: 3 Scientific Name: Sterkiella nova   Taxonomy   Expression System: Escherichia coli   Polymer: 4 Scientific Name: Sterkiella nova   Taxonomy   Expression System: Escherichia coli       Related PDB Entries Hide Identifier Details 1jb7  SAME PROTEIN (ALPHA AND BETA SUBUNITS) COMPLEXED WITH COGNATE SSDNA GGGGTTTTGGGG  1k8g  35 KDA N-TERMINAL FRAGMENT OF ALPHA SUBUNIT ALONE COMPLEXED WITH TTGGGG  1kix  DIMER OF ALPHA SUBUNIT ALONE COMPLEXED WITH TTTTGGGG  1otc  SAME PROTEIN (ALPHA AND BETA SUBUNITS) COMPLEXED WITH COGNATE SSDNA GGGGTTTTGGGG  1pa6  Crystal Structure of the Oxytricha Nova Telomere End-binding Protein Complexed with Noncognate ssDNA GGGGTTTTGAGG  1ph1  Crystal Structure of the Oxytricha Nova Telomere End-binding Protein Complexed with Noncognate ssDNA GGGGTTTTGGGGT  1ph2  Crystal Structure of the Oxytricha Nova Telomere End-binding Protein Complexed with Noncognate ssDNA GGGGTTTTG  1ph3  Crystal Structure of the Oxytricha Nova Telomere End-binding Protein Complexed with Noncognate ssDNA GGGGTTTTGGTG  1ph5  Crystal Structure of the Oxytricha Nova Telomere End-binding Protein Complexed with Noncognate ssDNA GGGGTTTTG(3DR)GG  1ph6  Crystal Structure of the Oxytricha Nova Telomere End-binding Protein Complexed with Noncognate ssDNA GGGGTTTTGTGG  1ph7  Crystal Structure of the Oxytricha Nova Telomere End-binding Protein Complexed with Noncognate ssDNA GGGGTTTTGIGG  1ph8  Crystal Structure of the Oxytricha Nova Telomere End-binding Protein Complexed with Noncognate ssDNA GGGGTTTTGCGG  1ph9  Crystal Structure of the Oxytricha Nova Telomere End-binding Protein Complexed with Noncognate ssDNA GGGGTTTTGAGG  1phj  Crystal Structure of the Oxytricha Nova Telomere End-binding Protein Complexed with Noncognate ssDNA GG(3DR)GTTTTGGGG      Ligand Chemical Component Hide Identifier Formula Name Interactions CL Search  Download  Cl CHLORIDE ION   Ligand Explorer NA Search  Download  Na SODIUM ION   Ligand Explorer     External Domain Annotations Hide SCOP Classification v1.75: 4 Domains - data from SCOP   CATH Classification v3.4.0: 4 Domains - data from CATH   Pfam Classification: 4 Domains - data from Pfam   GO Terms: 12 Terms - data from GO      Structural Biology Knowledgebase Data Hide   Nucleic Acid Database Hide View the NDB ID associated with this structure: PD0438     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Theobald, D.L.,  Schultz, S.C. Deposition:   2003-05-29 Release:   2003-06-17 Last Modified (REVDAT):   2011-11-16     Revision History    Hide Mouse over text for details 2011-11-16 Atom occupancy 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data:   Structure Factors EDS   Resolution[Å]:   2.30 R-Value: 0.214 (obs.) R-Free: 0.251 Space Group: P 61 2 2 Unit Cell:   Length [Å] Angles [°] a = 93.45 α = 90.00  b = 93.45 β = 90.00  c = 422.56 γ = 120.00