1PDW

Crystal structure of human DJ-1, P 1 21 1 space group

Structural Biology Knowledgebase: 1PDW SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.243
  • R-Value Work: 0.180

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1PDW

Classification: PROTEIN BINDING

Total Structure Weight: 169407.69

Macromolecule Entities
Molecule Chains Length Organism Details
DJ-1 A, B, C..., D, E, F, G, HA, B, C, D, E, F, G, H 197 Homo sapiens EC#: 3.1.2 IUBMB 3.5.1 IUBMB
Mutation: M17M, M26M, M133M, M134M
Gene Name(s): PARK7 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B, C, D, E, F, G, H L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.243
  • R-Value Work: 0.180
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 71.26 α = 90.00
b = 83.66 β = 100.56
c = 114.16 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-05-20
  • Released Date: 2003-06-24
  • Deposition author(s): Tao, X., Tong, L.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4