1GGU

HUMAN FACTOR XIII WITH CALCIUM BOUND IN THE ION SITE

Structural Biology Knowledgebase: 1GGU SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.313
  • R-Value Work: 0.227

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1GGU

Classification: TRANSFERASE

Total Structure Weight: 166549.39

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (COAGULATION FACTOR XIII) A, B 731 Homo sapiens EC#: 2.3.2.13 IUBMB
Fragment: FULL LENGTH
Mutation: Q567E
Details: CALCIUM BOUND IN THE ION SITE
Gene Name(s): F13A1 Gene View F13A

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CA
Query on CA

A, B CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.313
  • R-Value Work: 0.227
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 100.17 α = 90.00
b = 70.76 β = 106.11
c = 133.82 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-07-22
  • Released Date: 1999-09-16
  • Deposition author(s): Fox, B.A., Yee, V.C., Pederson, L.C., Trong, I.L., Bishop, P.D., Stenkamp, R.E., Teller, D.C.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4