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INTERCALATION OF AN 9ACRIDINE-PEPTIDE DRUG IN A DNA DODECAMER
DOI:10.2210/pdb1g3x/pdb   NDB ID: DD0037
1G3X
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: DNA
    Structure Weight: 44967.19
    Molecule: 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'
    Polymer: 1 Type: dna Length: 12
    Chains: A, B, C, D, E, F, G, H, I, J, K, L
    Molecule: N(ALPHA)-(9-ACRIDINOYL)-TETRAARGININE-AMIDE
    Polymer: 2 Type: protein Length: 5
    Chains: M
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    MG
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    MG Mg
    MAGNESIUM ION
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    9AC
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    9AC C14 H9 N O nonPolymer
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: DD0037
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly 1       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Malinina, L.,  Soler-Lopez, M.,  Aymami, J.,  Subirana, J.A.

    Deposition:   2000-10-25
    Release:   2002-08-16
    Last Modified (REVDAT):   2009-02-24
     
  •   Revision History    Hide
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    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
    N/A
    Resolution[Å]:   2.70
    R-Value: 0.225 (obs.)
    R-Free: 0.266
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 66.47 α = 90.00 
    b = 68.36 β = 90.00 
    c = 77.36 γ = 90.00