D-ALANINE:D-LACTATE LIGASE (LMDDL2) OF VANCOMYCIN-RESISTANT LEUCONOSTOC MESENTEROIDES DOI:10.2210/pdb1ehi/pdb

1EHI   Display Files  close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header)   Download Files  close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Biological Assembly (gz) (A+S)   Share this Page  close Facebook Twitter LinkedIn Email Link this Page

Primary Citation       Related Citations in PDB Entry (REMARK 1) Hide     Molecular Description Hide Classification: Ligase Structure Weight: 84485.55 Molecule: D-ALANINE:D-LACTATE LIGASE Polymer: 1 Type: protein Length: 377 Chains: A, B EC#: 6.3.2.4    Organism Leuconostoc mesenteroides Gene Name ddl UniProtKB:   Protein Feature View | Search PDB | P71454         Source Hide Polymer: 1 Scientific Name: Leuconostoc mesenteroides   Taxonomy   Expression System: Escherichia coli       Related PDB Entries Hide Identifier Details 1IOV  DdlB ligase with phosphonate and ADP  1IOW  DdlB Y215F mutant with phosphinate and ADP  2DLN  D-alanine:D-alanine ligase (DdlB) of E. coli complexed with phosphinate and ADP      Ligand Chemical Component Hide Identifier Formula Name Interactions ADP Search  Download  C10 H15 N5 O10 P2 ADENOSINE-5'-DIPHOSPHATE   Ligand Explorer MG Search  Download  Mg MAGNESIUM ION   Ligand Explorer PHY Search  Download  C6 H15 N O7 P2 1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPHORYL- PHOSPHINIC ACID   Ligand Explorer     External Domain Annotations Hide SCOP Classification v1.75: 4 Domains - data from SCOP   CATH Classification v3.4.0: 6 Domains - data from CATH   Pfam Classification: 3 Domains - data from Pfam   GO Terms: 10 Terms - data from GO      Structural Biology Knowledgebase Data Hide     Data in orange boxes are gathered from external resources (when available). Reset Layout

Biological Assembly            View in 3D More Images... Biological assembly 1 assigned by authors and generated by PISA (software) Downloadable viewers: Simple Viewer Protein Workshop Ligand Explorer Kiosk Viewer Other Viewers  KiNG WebMol QuickPDB FirstGlance         MyPDB Personal Annotations Hide     Deposition Summary Hide Authors:   Kuzin, A.P.,  Sun, T.,  Jorczak-Baillass, J.,  Healy, V.L.,  Walsh, C.T.,  Knox, J.R. Deposition:   2000-02-21 Release:   2000-05-23 Last Modified (REVDAT):   2009-02-24     Revision History    Hide Mouse over text for details 2011-07-13 Version format compliance     Experimental Details Hide Method:   X-RAY DIFFRACTION Exp. Data: N/A Resolution[Å]:   2.38 R-Value: 0.184 (obs.) R-Free: 0.257 Space Group: C 2 Unit Cell:   Length [Å] Angles [°] a = 118.20 α = 90.00  b = 90.80 β = 92.10  c = 82.10 γ = 90.00